On 20.12.2011 01:56, Thomas Gaillard wrote:
> Le Tuesday 20 December 2011 à 12:18:51AM, Jan-Philip Gehrcke a écrit :
>>
>> 2) Verify disulfide bonds with literature
>> =========================================
>>
>> 12 bridges to 108
>> 62 bridges to 114
>
> You can also read which CYS are engaged in a disulfide bond from the PDB
> headers (SSBOND entries) and rename them to CYX automatically.
>
> $ grep SSBOND 3EAC.pdb
> SSBOND 1 CYS A 122 CYS A 164 1555 1555 2.03
>
> ...
>
Would you in any case rely on the PDB header? :)
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Received on Tue Dec 20 2011 - 00:00:02 PST
