The series of values of distance I got from Amber 8 with first command is
different than the values I got from Amber 11 with the second command (I
used this command because the first one gave the value zero for all the
distances in amber 11 !!!)
*Best Regards,
Esam
*
On Sat, Dec 17, 2011 at 8:45 PM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> > I tried another command for measuring the same distances in Amber 11
> > : distance
> > dist_73-84_139-150 :73-84.CA :139-150.CA out distance.dat and for this
> > command I got out put file with the measured distance (not equal zero)
> but
> > in case of comparing the values of the same distance measurements for
> amber
> > 8 and amber 11 I found that it's not the same.
>
> What wasn't the same? Trajectories run with different versions of Amber?
> Series of measurements, or their average?
>
> Bill
>
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Received on Sat Dec 17 2011 - 14:00:02 PST
