Re: [AMBER] MMPBSA

From: Jason Swails <jason.swails.gmail.com>
Date: Fri, 25 Nov 2011 11:27:47 -0500

On Fri, Nov 25, 2011 at 7:47 AM, M. Reza Ganjalikhany <
ganjalikhany.gmail.com> wrote:

> Dear Amber users,
>
> I want to calculate solvation free energy of a solvent accessible loop in a
> protein.
>
> Is it possible to set the loop as mask in mmpbsa/mmgbsa?
>

A mask for what?


>
> Any help will be appreciated.
>
> Regards,
> M.Reza
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>



-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Fri Nov 25 2011 - 08:30:03 PST
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