Hi Sai,
The AMBER11 manual (assuming that is the version you are using, but I don't
know about ncsu in any other versions) is the only definitive source that I
know of.
Brian
On Wed, Nov 16, 2011 at 8:26 PM, Sai Kumar Ramadugu <sramadugu.gmail.com>wrote:
> Dear Amber Users,
> Where can I read more on the options used in ncsu_smd and ncsu_pmd. I want
> to know more about path_mode and path in general.
> I want to use the ncsu_smd and separate the ligand and use ncsu_pmd to do
> umbrella sampling.
>
> Regards
> Sai
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>
--
================================ Current Address =======================
Brian Radak : BioMaPS
Institute for Quantitative Biology
PhD candidate - York Research Group : Rutgers, The State
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Department of Chemistry : Piscataway, NJ
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radak004.umn.edu :
radakb.biomaps.rutgers.edu
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Received on Thu Nov 17 2011 - 06:30:09 PST