Dear Sir
I am compiling AMBER9 in
SGI_ALTIX XE1300. The command I used was as below. But it shows error. I have cut and paste the output that I got. Sorry it is quite long.
Could you kindly help to compile this properly? Appreciate your help in advance.
ptmlxclus:/mnt/data1/application/amber9/src/pmemd # ./configure sgi_altix ifort mpi pubfft
Intel ifort compiler found; version information:
Version 10.1
configure assumes Intel MKL is installed in /mnt/data/cluster/intel/mkl/10.0.010
File config_data/fft.pubfft being used...
File config_data/sgi_altix.ifort.mpi being used...
PMEMD Configurate successfully
completed.
ptmlxclus:/mnt/data1/application/amber9/src/pmemd #
ptmlxclus:/mnt/data1/application/amber9/src/pmemd # make install
cd src && make install
make[1]: Entering directory `/mnt/data1/application/amber9/src/pmemd/src'
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL gbl_constants.fpp gbl_constants.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 gbl_constants.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL gbl_datatypes.fpp gbl_datatypes.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 gbl_datatypes.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL state_info.fpp state_info.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 state_info.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL file_io_dat.fpp file_io_dat.f90
ifort
-c -auto -IPF_fma -ftz -ip -O3 file_io_dat.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL parallel_dat.fpp parallel_dat.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 parallel_dat.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pmemd_lib.fpp pmemd_lib.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 pmemd_lib.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL file_io.fpp file_io.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 file_io.f90
file_io.f90(746): (col. 10) remark: PARTIAL LOOP WAS VECTORIZED.
file_io.f90(746): (col. 10) remark: PARTIAL LOOP WAS VECTORIZED.
file_io.f90(791): (col. 12) remark: LOOP WAS VECTORIZED.
file_io.f90(916): (col. 12) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL
mdin_ctrl_dat.fpp mdin_ctrl_dat.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 mdin_ctrl_dat.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL axis_optimize.fpp axis_optimize.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 axis_optimize.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL fft1d.fpp fft1d.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 fft1d.f90
fft1d.f90(1372): (col. 3) remark: LOOP WAS VECTORIZED.
fft1d.f90(1754): (col. 9) remark: LOOP WAS VECTORIZED.
fft1d.f90(1761): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1770): (col. 7) remark: PERMUTED LOOP WAS VECTORIZED.
fft1d.f90(1779): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1792): (col. 5) remark: LOOP WAS VECTORIZED.
fft1d.f90(1804): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1833): (col. 5) remark: LOOP WAS VECTORIZED.
fft1d.f90(1864): (col. 11)
remark: LOOP WAS VECTORIZED.
fft1d.f90(1666): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1514): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1577): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1432): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1258): (col. 17) remark: LOOP WAS VECTORIZED.
fft1d.f90(685): (col. 3) remark: LOOP WAS VECTORIZED.
fft1d.f90(1065): (col. 9) remark: LOOP WAS VECTORIZED.
fft1d.f90(1073): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1082): (col. 7) remark: PERMUTED LOOP WAS VECTORIZED.
fft1d.f90(1090): (col. 5) remark: PERMUTED LOOP WAS VECTORIZED.
fft1d.f90(1104): (col. 5) remark: LOOP WAS VECTORIZED.
fft1d.f90(1116): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(1143): (col. 5) remark: LOOP WAS VECTORIZED.
fft1d.f90(1175): (col. 11) remark: LOOP WAS VECTORIZED.
fft1d.f90(977): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(825): (col. 7) remark: LOOP WAS
VECTORIZED.
fft1d.f90(888): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(743): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(571): (col. 17) remark: LOOP WAS VECTORIZED.
fft1d.f90(490): (col. 7) remark: LOOP WAS VECTORIZED.
fft1d.f90(400): (col. 17) remark: LOOP WAS VECTORIZED.
fft1d.f90(215): (col. 8) remark: LOOP WAS VECTORIZED.
fft1d.f90(186): (col. 8) remark: LOOP WAS VECTORIZED.
fft1d.f90(112): (col. 8) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL mdin_ewald_dat.fpp mdin_ewald_dat.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 mdin_ewald_dat.f90
/lib/cpp
-traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL
-DGB_IA64_ACCEL nextprmtop_section.fpp nextprmtop_section.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 nextprmtop_section.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL
-DGB_IA64_ACCEL prmtop_dat.fpp prmtop_dat.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 prmtop_dat.f90
prmtop_dat.f90(1305): (col. 3) remark: PARTIAL LOOP WAS VECTORIZED.
prmtop_dat.f90(1305): (col. 3) remark: PARTIAL LOOP WAS VECTORIZED.
prmtop_dat.f90(1305): (col. 3) remark: PARTIAL LOOP WAS VECTORIZED.
prmtop_dat.f90(1305): (col. 3) remark: PARTIAL LOOP WAS VECTORIZED.
prmtop_dat.f90(324): (col. 5) remark: LOOP WAS VECTORIZED.
prmtop_dat.f90(659): (col. 5) remark: LOOP WAS VECTORIZED.
prmtop_dat.f90(784): (col. 8) remark: PARTIAL LOOP WAS VECTORIZED.
prmtop_dat.f90(784): (col. 8) remark: PARTIAL LOOP WAS VECTORIZED.
prmtop_dat.f90(784): (col. 8) remark: PARTIAL LOOP WAS VECTORIZED.
prmtop_dat.f90(870): (col. 5) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL inpcrd_dat.fpp inpcrd_dat.f90
ifort -c -auto -IPF_fma -ftz -ip -O3
inpcrd_dat.f90
inpcrd_dat.f90(347): (col. 10) remark: LOOP WAS VECTORIZED.
inpcrd_dat.f90(347): (col. 10) remark: LOOP WAS VECTORIZED.
inpcrd_dat.f90(356): (col. 5) remark: LOOP WAS VECTORIZED.
inpcrd_dat.f90(311): (col. 3) remark: LOOP WAS VECTORIZED.
inpcrd_dat.f90(313): (col. 3) remark: LOOP WAS VECTORIZED.
inpcrd_dat.f90(216): (col. 5) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL dynamics_dat.fpp dynamics_dat.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 dynamics_dat.f90
dynamics_dat.f90(713): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics_dat.f90(715): (col. 7) remark: LOOP WAS VECTORIZED.
dynamics_dat.f90(237): (col. 3) remark: PARTIAL LOOP WAS VECTORIZED.
dynamics_dat.f90(240): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics_dat.f90(237): (col. 3) remark: LOOP WAS VECTORIZED.
dynamics_dat.f90(250): (col. 5) remark: LOOP WAS
VECTORIZED.
dynamics_dat.f90(257): (col. 10) remark: LOOP WAS VECTORIZED.
dynamics_dat.f90(257): (col. 10) remark: LOOP WAS VECTORIZED.
dynamics_dat.f90(274): (col. 7) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL random.fpp random.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 random.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL dynamics.fpp dynamics.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 dynamics.f90
dynamics.f90(542): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics.f90(485): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics.f90(205): (col. 3) remark: LOOP WAS VECTORIZED.
dynamics.f90(217): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics.f90(220): (col. 7) remark: LOOP WAS VECTORIZED.
dynamics.f90(223): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics.f90(236): (col. 5) remark: LOOP
WAS VECTORIZED.
dynamics.f90(250): (col. 13) remark: LOOP WAS VECTORIZED.
dynamics.f90(257): (col. 7) remark: LOOP WAS VECTORIZED.
dynamics.f90(263): (col. 9) remark: LOOP WAS VECTORIZED.
dynamics.f90(264): (col. 9) remark: LOOP WAS VECTORIZED.
dynamics.f90(278): (col. 11) remark: LOOP WAS VECTORIZED.
dynamics.f90(283): (col. 7) remark: LOOP WAS VECTORIZED.
dynamics.f90(86): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics.f90(89): (col. 7) remark: LOOP WAS VECTORIZED.
dynamics.f90(104): (col. 5) remark: LOOP WAS VECTORIZED.
dynamics.f90(118): (col. 13) remark: LOOP WAS VECTORIZED.
dynamics.f90(125): (col. 7) remark: LOOP WAS VECTORIZED.
dynamics.f90(129): (col. 7) remark: LOOP WAS VECTORIZED.
dynamics.f90(141): (col. 11) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pbc.fpp pbc.f90
ifort -c -auto -IPF_fma -ftz -ip -O3
pbc.f90
pbc.f90(875): (col. 5) remark: LOOP WAS VECTORIZED.
pbc.f90(941): (col. 5) remark: LOOP WAS VECTORIZED.
pbc.f90(763): (col. 5) remark: LOOP WAS VECTORIZED.
pbc.f90(790): (col. 7) remark: LOOP WAS VECTORIZED.
pbc.f90(700): (col. 3) remark: LOOP WAS VECTORIZED.
pbc.f90(709): (col. 3) remark: LOOP WAS VECTORIZED.
pbc.f90(266): (col. 5) remark: LOOP WAS VECTORIZED.
pbc.f90(277): (col. 5) remark: LOOP WAS VECTORIZED.
pbc.f90(302): (col. 3) remark: LOOP WAS VECTORIZED.
pbc.f90(115): (col. 5) remark: LOOP WAS VECTORIZED.
pbc.f90(149): (col. 5) remark: LOOP WAS VECTORIZED.
pbc.f90(162): (col. 5) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL img.fpp img.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 img.f90
img.f90(178): (col. 9) remark: LOOP WAS VECTORIZED.
img.f90(106): (col. 3) remark: LOOP WAS VECTORIZED.
img.f90(108): (col.
3) remark: LOOP WAS VECTORIZED.
img.f90(109): (col. 3) remark: LOOP WAS VECTORIZED.
img.f90(110): (col. 3) remark: LOOP WAS VECTORIZED.
img.f90(111): (col. 3) remark: LOOP WAS VECTORIZED.
img.f90(144): (col. 10) remark: LOOP WAS VECTORIZED.
img.f90(144): (col. 10) remark: LOOP WAS VECTORIZED.
img.f90(144): (col. 10) remark: LOOP WAS VECTORIZED.
img.f90(144): (col. 10) remark: LOOP WAS VECTORIZED.
img.f90(144): (col. 10) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL parallel.fpp parallel.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 parallel.f90
parallel.f90(774): (col. 3) remark: LOOP WAS VECTORIZED.
parallel.f90(672): (col. 5) remark: LOOP WAS VECTORIZED.
parallel.f90(620): (col. 8) remark: LOOP WAS VECTORIZED.
parallel.f90(591): (col. 3) remark: LOOP WAS VECTORIZED.
parallel.f90(541): (col. 8) remark: LOOP WAS
VECTORIZED.
parallel.f90(71): (col. 3) remark: LOOP WAS VECTORIZED.
parallel.f90(125): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL cit.fpp cit.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 cit.f90
cit.f90(96): (col. 3) remark: LOOP WAS VECTORIZED.
cit.f90(202): (col. 8) remark: LOOP WAS VECTORIZED.
cit.f90(207): (col. 5) remark: LOOP WAS VECTORIZED.
cit.f90(209): (col. 5) remark: LOOP WAS VECTORIZED.
cit.f90(315): (col. 3) remark: LOOP WAS VECTORIZED.
cit.f90(316): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL constraints.fpp constraints.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 constraints.f90
constraints.f90(681): (col. 3) remark: LOOP WAS VECTORIZED.
constraints.f90(133): (col. 5) remark: LOOP WAS VECTORIZED.
constraints.f90(152):
(col. 5) remark: LOOP WAS VECTORIZED.
constraints.f90(153): (col. 5) remark: LOOP WAS VECTORIZED.
constraints.f90(154): (col. 5) remark: LOOP WAS VECTORIZED.
constraints.f90(192): (col. 10) remark: LOOP WAS VECTORIZED.
constraints.f90(192): (col. 10) remark: LOOP WAS VECTORIZED.
constraints.f90(192): (col. 10) remark: LOOP WAS VECTORIZED.
constraints.f90(192): (col. 10) remark: LOOP WAS VECTORIZED.
constraints.f90(89): (col. 8) remark: LOOP WAS VECTORIZED.
constraints.f90(89): (col. 8) remark: LOOP WAS VECTORIZED.
constraints.f90(89): (col. 8) remark: LOOP WAS VECTORIZED.
constraints.f90(89): (col. 8) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL nb_pairlist.fpp nb_pairlist.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 nb_pairlist.f90
nb_pairlist.f90(1124): (col. 5) remark: LOOP WAS VECTORIZED.
nb_pairlist.f90(991): (col. 3) remark:
BLOCK WAS VECTORIZED.
nb_pairlist.f90(265): (col. 3) remark: LOOP WAS VECTORIZED.
nb_pairlist.f90(373): (col. 3) remark: LOOP WAS VECTORIZED.
nb_pairlist.f90(469): (col. 3) remark: LOOP WAS VECTORIZED.
nb_pairlist.f90(576): (col. 12) remark: LOOP WAS VECTORIZED.
nb_pairlist.f90(576): (col. 12) remark: LOOP WAS VECTORIZED.
nb_pairlist.f90(580): (col. 12) remark: LOOP WAS VECTORIZED.
nb_pairlist.f90(580): (col. 12) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pme_fft.fpp pme_fft.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 pme_fft.f90
pme_fft.f90(1160): (col. 5) remark: LOOP WAS VECTORIZED.
pme_fft.f90(894): (col. 10) remark: LOOP WAS VECTORIZED.
pme_fft.f90(811): (col. 5) remark: LOOP WAS VECTORIZED.
pme_fft.f90(524): (col. 10) remark: LOOP WAS VECTORIZED.
pme_fft.f90(324): (col. 3) remark: LOOP WAS VECTORIZED.
pme_fft.f90(361):
(col. 3) remark: LOOP WAS VECTORIZED.
pme_fft.f90(397): (col. 3) remark: LOOP WAS VECTORIZED.
pme_fft.f90(405): (col. 3) remark: LOOP WAS VECTORIZED.
pme_fft.f90(231): (col. 8) remark: LOOP WAS VECTORIZED.
pme_fft.f90(231): (col. 8) remark: LOOP WAS VECTORIZED.
pme_fft.f90(231): (col. 8) remark: LOOP WAS VECTORIZED.
pme_fft.f90(231): (col. 8) remark: LOOP WAS VECTORIZED.
pme_fft.f90(160): (col. 9) remark: LOOP WAS VECTORIZED.
pme_fft.f90(160): (col. 9) remark: LOOP WAS VECTORIZED.
pme_fft.f90(160): (col. 9) remark: LOOP WAS VECTORIZED.
pme_fft.f90(160): (col. 9) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL timers.fpp timers.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 timers.f90
timers.f90(307): (col. 3) remark: LOOP WAS VECTORIZED.
timers.f90(312): (col. 3) remark: LOOP WAS VECTORIZED.
timers.f90(609): (col. 5) remark: LOOP WAS
VECTORIZED.
timers.f90(654): (col. 7) remark: LOOP WAS VECTORIZED.
timers.f90(680): (col. 5) remark: LOOP WAS VECTORIZED.
timers.f90(709): (col. 7) remark: LOOP WAS VECTORIZED.
timers.f90(764): (col. 9) remark: LOOP WAS VECTORIZED.
timers.f90(802): (col. 7) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL bspline.fpp bspline.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 bspline.f90
bspline.f90(715): (col. 3) remark: LOOP WAS VECTORIZED.
bspline.f90(676): (col. 3) remark: LOOP WAS VECTORIZED.
bspline.f90(625): (col. 12) remark: LOOP WAS VECTORIZED.
bspline.f90(630): (col. 10) remark: LOOP WAS VECTORIZED.
bspline.f90(633): (col. 10) remark: LOOP WAS VECTORIZED.
bspline.f90(637): (col. 10) remark: LOOP WAS VECTORIZED.
bspline.f90(638): (col. 10) remark: REVERSED LOOP WAS VECTORIZED.
bspline.f90(642): (col. 10) remark: LOOP WAS
VECTORIZED.
bspline.f90(496): (col. 14) remark: LOOP WAS VECTORIZED.
bspline.f90(499): (col. 12) remark: LOOP WAS VECTORIZED.
bspline.f90(376): (col. 12) remark: LOOP WAS VECTORIZED.
bspline.f90(379): (col. 10) remark: LOOP WAS VECTORIZED.
bspline.f90(383): (col. 10) remark: LOOP WAS VECTORIZED.
bspline.f90(288): (col. 10) remark: LOOP WAS VECTORIZED.
bspline.f90(101): (col. 5) remark: LOOP WAS VECTORIZED.
bspline.f90(224): (col. 5) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL nmr_lib.fpp nmr_lib.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 nmr_lib.f90
nmr_lib.f90(2890): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(2221): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(2333): (col. 14) remark: PARTIAL LOOP WAS VECTORIZED.
nmr_lib.f90(2333): (col. 14) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(789): (col. 10) remark: LOOP WAS
VECTORIZED.
nmr_lib.f90(429): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1807): (col. 9) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1907): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1730): (col. 9) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1510): (col. 10) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1512): (col. 10) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1623): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1152): (col. 10) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(1218): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_lib.f90(218): (col. 10) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL nmr_calls.fpp nmr_calls.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 nmr_calls.f90
nmr_calls.f90(3500): (col. 5) remark: PARTIAL LOOP WAS VECTORIZED.
nmr_calls.f90(3043): (col. 6) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2419): (col. 5)
remark: PARTIAL LOOP WAS VECTORIZED.
nmr_calls.f90(2419): (col. 5) remark: PARTIAL LOOP WAS VECTORIZED.
nmr_calls.f90(2438): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2502): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2516): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2530): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2545): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2559): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2576): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2592): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2606): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(2619): (col. 5) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(862): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: PARTIAL LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: PARTIAL LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark:
LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(639): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(575): (col. 8) remark: PARTIAL LOOP WAS VECTORIZED.
nmr_calls.f90(586): (col. 3) remark: FUSED LOOP WAS VECTORIZED.
nmr_calls.f90(590): (col. 3) remark: FUSED LOOP WAS VECTORIZED.
nmr_calls.f90(1770): (col. 7) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(241): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(242): (col. 3) remark: LOOP WAS
VECTORIZED.
nmr_calls.f90(278): (col. 10) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(278): (col. 10) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(143): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(156): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(156): (col. 8) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(200): (col. 3) remark: LOOP WAS VECTORIZED.
nmr_calls.f90(201): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL angles.fpp angles.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 angles.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL bonds.fpp bonds.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 bonds.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL dihedrals.fpp dihedrals.f90
ifort -c -auto -IPF_fma -ftz -ip -O3
dihedrals.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL shake.fpp shake.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 shake.f90
shake.f90(1374): (col. 3) remark: LOOP WAS VECTORIZED.
shake.f90(1415): (col. 16) remark: LOOP WAS VECTORIZED.
shake.f90(1439): (col. 14) remark: LOOP WAS VECTORIZED.
shake.f90(391): (col. 3) remark: LOOP WAS VECTORIZED.
shake.f90(392): (col. 3) remark: LOOP WAS VECTORIZED.
shake.f90(605): (col. 12) remark: LOOP WAS VECTORIZED.
shake.f90(626): (col. 8) remark: LOOP WAS VECTORIZED.
shake.f90(139): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL loadbal.fpp loadbal.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 loadbal.f90
loadbal.f90(1107): (col. 3) remark: LOOP WAS VECTORIZED.
loadbal.f90(1163): (col. 3) remark: LOOP WAS VECTORIZED.
loadbal.f90(1184):
(col. 9) remark: LOOP WAS VECTORIZED.
loadbal.f90(1191): (col. 9) remark: LOOP WAS VECTORIZED.
loadbal.f90(1260): (col. 15) remark: LOOP WAS VECTORIZED.
loadbal.f90(1274): (col. 15) remark: LOOP WAS VECTORIZED.
loadbal.f90(1311): (col. 13) remark: LOOP WAS VECTORIZED.
loadbal.f90(1318): (col. 13) remark: LOOP WAS VECTORIZED.
loadbal.f90(1393): (col. 15) remark: LOOP WAS VECTORIZED.
loadbal.f90(1407): (col. 15) remark: LOOP WAS VECTORIZED.
loadbal.f90(1463): (col. 13) remark: LOOP WAS VECTORIZED.
loadbal.f90(1470): (col. 13) remark: LOOP WAS VECTORIZED.
loadbal.f90(1488): (col. 3) remark: LOOP WAS VECTORIZED.
loadbal.f90(758): (col. 3) remark: LOOP WAS VECTORIZED.
loadbal.f90(764): (col. 20) remark: LOOP WAS VECTORIZED.
loadbal.f90(768): (col. 3) remark: LOOP WAS VECTORIZED.
loadbal.f90(805): (col. 5) remark: LOOP WAS VECTORIZED.
loadbal.f90(821): (col. 5) remark: PARTIAL LOOP WAS
VECTORIZED.
loadbal.f90(858): (col. 5) remark: PARTIAL LOOP WAS VECTORIZED.
loadbal.f90(584): (col. 10) remark: LOOP WAS VECTORIZED.
loadbal.f90(584): (col. 10) remark: LOOP WAS VECTORIZED.
loadbal.f90(584): (col. 10) remark: LOOP WAS VECTORIZED.
loadbal.f90(584): (col. 10) remark: LOOP WAS VECTORIZED.
loadbal.f90(584): (col. 10) remark: PARTIAL LOOP WAS VECTORIZED.
loadbal.f90(584): (col. 10) remark: PARTIAL LOOP WAS VECTORIZED.
loadbal.f90(969): (col. 3) remark: FUSED LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8)
remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(976): (col. 8) remark: LOOP WAS VECTORIZED.
loadbal.f90(1006): (col. 5) remark: LOOP WAS VECTORIZED.
loadbal.f90(1020): (col. 3) remark: LOOP WAS VECTORIZED.
loadbal.f90(1043): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pme_recip.fpp pme_recip.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 pme_recip.f90
pme_recip.f90(2217): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2218): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2219): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2221): (col. 8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2221): (col.
8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2221): (col. 8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2221): (col. 8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2234): (col. 10) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2234): (col. 10) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2234): (col. 10) remark: LOOP WAS VECTORIZED.
pme_recip.f90(1626): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(733): (col. 3) remark: PARTIAL LOOP WAS VECTORIZED.
pme_recip.f90(463): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(466): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(470): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(473): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(392): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(137): (col. 10) remark: PARTIAL LOOP WAS VECTORIZED.
pme_recip.f90(137): (col. 10) remark: PARTIAL LOOP WAS VECTORIZED.
pme_recip.f90(157): (col. 8) remark: LOOP
WAS VECTORIZED.
pme_recip.f90(157): (col. 8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(157): (col. 8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(157): (col. 8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2160): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2164): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2168): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(2030): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(245): (col. 8) remark: LOOP WAS VECTORIZED.
pme_recip.f90(250): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(253): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(257): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(260): (col. 3) remark: LOOP WAS VECTORIZED.
pme_recip.f90(946): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL ene_frc_splines.fpp ene_frc_splines.f90
ifort -c
-auto -IPF_fma -ftz -ip -O3 ene_frc_splines.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pme_direct.fpp pme_direct.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 pme_direct.f90
pme_direct.f90(404): (col. 9) remark: LOOP WAS VECTORIZED.
pme_direct.f90(126): (col. 3) remark: LOOP WAS VECTORIZED.
pme_direct.f90(156): (col. 10) remark: LOOP WAS VECTORIZED.
pme_direct.f90(89): (col. 8) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL bintraj.fpp bintraj.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 bintraj.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL runfiles.fpp runfiles.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 runfiles.f90
runfiles.f90(248): (col. 3) remark: LOOP WAS VECTORIZED.
runfiles.f90(69): (col. 3) remark: LOOP WAS
VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pme_force.fpp pme_force.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 pme_force.f90
pme_force.f90(1046): (col. 5) remark: BLOCK WAS VECTORIZED.
pme_force.f90(1051): (col. 5) remark: BLOCK WAS VECTORIZED.
pme_force.f90(1057): (col. 5) remark: BLOCK WAS VECTORIZED.
pme_force.f90(931): (col. 5) remark: LOOP WAS VECTORIZED.
pme_force.f90(864): (col. 3) remark: LOOP WAS VECTORIZED.
pme_force.f90(880): (col. 3) remark: LOOP WAS VECTORIZED.
pme_force.f90(272): (col. 3) remark: LOOP WAS VECTORIZED.
pme_force.f90(279): (col. 3) remark: LOOP WAS VECTORIZED.
pme_force.f90(288): (col. 5) remark: LOOP WAS VECTORIZED.
pme_force.f90(366): (col. 5) remark: LOOP WAS VECTORIZED.
pme_force.f90(404): (col. 26) remark: BLOCK WAS VECTORIZED.
pme_force.f90(530): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(531): (col. 7)
remark: LOOP WAS VECTORIZED.
pme_force.f90(532): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(533): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(534): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(535): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(542): (col. 5) remark: FUSED LOOP WAS VECTORIZED.
pme_force.f90(563): (col. 8) remark: LOOP WAS VECTORIZED.
pme_force.f90(563): (col. 8) remark: LOOP WAS VECTORIZED.
pme_force.f90(588): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(589): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(590): (col. 7) remark: LOOP WAS VECTORIZED.
pme_force.f90(145): (col. 3) remark: LOOP WAS VECTORIZED.
pme_force.f90(146): (col. 3) remark: LOOP WAS VECTORIZED.
pme_force.f90(148): (col. 3) remark: LOOP WAS VECTORIZED.
pme_force.f90(183): (col. 10) remark: LOOP WAS VECTORIZED.
pme_force.f90(183): (col. 10) remark: LOOP WAS
VECTORIZED.
pme_force.f90(183): (col. 10) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL degcnt.fpp degcnt.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 degcnt.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL gb_ene.fpp gb_ene.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 gb_ene.f90
gb_ene.f90(1757): (col. 3) remark: LOOP WAS VECTORIZED.
gb_ene.f90(1880): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(1881): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(2141): (col. 3) remark: LOOP WAS VECTORIZED.
gb_ene.f90(2149): (col. 5) remark: PARTIAL LOOP WAS VECTORIZED.
gb_ene.f90(2149): (col. 5) remark: PARTIAL LOOP WAS VECTORIZED.
gb_ene.f90(2165): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(2173): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(582): (col. 5) remark: LOOP WAS
VECTORIZED.
gb_ene.f90(582): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(582): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(582): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(582): (col. 5) remark: PARTIAL LOOP WAS VECTORIZED.
gb_ene.f90(582): (col. 5) remark: PARTIAL LOOP WAS VECTORIZED.
gb_ene.f90(582): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(582): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(600): (col. 3) remark: LOOP WAS VECTORIZED.
gb_ene.f90(606): (col. 3) remark: LOOP WAS VECTORIZED.
gb_ene.f90(626): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(650): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(652): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(655): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(662): (col. 7) remark: LOOP WAS VECTORIZED.
gb_ene.f90(1032): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(1061): (col. 5) remark: LOOP WAS
VECTORIZED.
gb_ene.f90(1180): (col. 7) remark: LOOP WAS VECTORIZED.
gb_ene.f90(320): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(321): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(322): (col. 5) remark: LOOP WAS VECTORIZED.
gb_ene.f90(323): (col. 5) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL gb_force.fpp gb_force.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 gb_force.f90
gb_force.f90(108): (col. 3) remark: LOOP WAS VECTORIZED.
gb_force.f90(117): (col. 5) remark: LOOP WAS VECTORIZED.
gb_force.f90(126): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL runmd.fpp runmd.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 runmd.f90
runmd.f90(1788): (col. 12) remark: LOOP WAS VECTORIZED.
runmd.f90(1848): (col. 12) remark: LOOP WAS
VECTORIZED.
runmd.f90(1848): (col. 12) remark: LOOP WAS VECTORIZED.
runmd.f90(1690): (col. 3) remark: LOOP WAS VECTORIZED.
runmd.f90(1697): (col. 5) remark: LOOP WAS VECTORIZED.
runmd.f90(173): (col. 3) remark: LOOP WAS VECTORIZED.
runmd.f90(234): (col. 3) remark: FUSED LOOP WAS VECTORIZED.
runmd.f90(336): (col. 7) remark: PARTIAL LOOP WAS VECTORIZED.
runmd.f90(432): (col. 3) remark: LOOP WAS VECTORIZED.
runmd.f90(520): (col. 7) remark: PARTIAL LOOP WAS VECTORIZED.
runmd.f90(753): (col. 7) remark: LOOP WAS VECTORIZED.
runmd.f90(971): (col. 11) remark: LOOP WAS VECTORIZED.
runmd.f90(980): (col. 13) remark: LOOP WAS VECTORIZED.
runmd.f90(984): (col. 11) remark: LOOP WAS VECTORIZED.
runmd.f90(992): (col. 11) remark: LOOP WAS VECTORIZED.
runmd.f90(994): (col. 11) remark: LOOP WAS VECTORIZED.
runmd.f90(1098): (col. 16) remark: LOOP WAS VECTORIZED.
runmd.f90(1109): (col. 16) remark: LOOP WAS
VECTORIZED.
runmd.f90(1124): (col. 7) remark: LOOP WAS VECTORIZED.
runmd.f90(1146): (col. 7) remark: LOOP WAS VECTORIZED.
runmd.f90(1264): (col. 11) remark: LOOP WAS VECTORIZED.
runmd.f90(1278): (col. 11) remark: LOOP WAS VECTORIZED.
runmd.f90(1279): (col. 11) remark: LOOP WAS VECTORIZED.
runmd.f90(1299): (col. 7) remark: LOOP WAS VECTORIZED.
runmd.f90(1407): (col. 3) remark: LOOP WAS VECTORIZED.
runmd.f90(1427): (col. 3) remark: LOOP WAS VECTORIZED.
runmd.f90(1471): (col. 3) remark: LOOP WAS VECTORIZED.
runmd.f90(1568): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL alltasks_setup.fpp alltasks_setup.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 alltasks_setup.f90
alltasks_setup.f90(171): (col. 10) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(194): (col. 10) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(194): (col. 10)
remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(194): (col. 10) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(194): (col. 10) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(204): (col. 3) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(216): (col. 5) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(268): (col. 5) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(269): (col. 5) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(270): (col. 5) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(271): (col. 5) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(429): (col. 5) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(529): (col. 8) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(529): (col. 8) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(550): (col. 3) remark: LOOP WAS VECTORIZED.
alltasks_setup.f90(554): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI
-DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL runmin.fpp runmin.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 runmin.f90
runmin.f90(163): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(222): (col. 5) remark: LOOP WAS VECTORIZED.
runmin.f90(302): (col. 9) remark: LOOP WAS VECTORIZED.
runmin.f90(331): (col. 9) remark: LOOP WAS VECTORIZED.
runmin.f90(332): (col. 9) remark: LOOP WAS VECTORIZED.
runmin.f90(345): (col. 7) remark: LOOP WAS VECTORIZED.
runmin.f90(362): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(368): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(380): (col. 10) remark: LOOP WAS VECTORIZED.
runmin.f90(402): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(403): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(625): (col. 5) remark: LOOP WAS VECTORIZED.
runmin.f90(626): (col. 5) remark: LOOP WAS VECTORIZED.
runmin.f90(542): (col. 9) remark: LOOP WAS VECTORIZED.
runmin.f90(579): (col. 10) remark:
LOOP WAS VECTORIZED.
runmin.f90(580): (col. 10) remark: LOOP WAS VECTORIZED.
runmin.f90(590): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(602): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(603): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(604): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(446): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(451): (col. 11) remark: LOOP WAS VECTORIZED.
runmin.f90(468): (col. 3) remark: LOOP WAS VECTORIZED.
runmin.f90(470): (col. 3) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL veclib.fpp veclib.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 veclib.f90
icc -c pmemd_clib.c
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pme_setup.fpp pme_setup.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 pme_setup.f90
pme_setup.f90(405): (col. 3)
remark: LOOP WAS VECTORIZED.
pme_setup.f90(130): (col. 3) remark: LOOP WAS VECTORIZED.
pme_setup.f90(142): (col. 5) remark: LOOP WAS VECTORIZED.
pme_setup.f90(78): (col. 8) remark: LOOP WAS VECTORIZED.
pme_setup.f90(78): (col. 8) remark: LOOP WAS VECTORIZED.
pme_setup.f90(85): (col. 8) remark: LOOP WAS VECTORIZED.
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL get_cmdline.fpp get_cmdline.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 get_cmdline.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL master_setup.fpp master_setup.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 master_setup.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC -DMKL -DGB_IA64_ACCEL pmemd.fpp pmemd.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 pmemd.f90
/lib/cpp -traditional -P -DPUBFFT -DMPI -DSLOW_INDIRECTVEC
-DMKL -DGB_IA64_ACCEL erfcfun.fpp erfcfun.f90
ifort -c -auto -IPF_fma -ftz -ip -O3 erfcfun.f90
ifort
-i-static -o pmemd gbl_constants.o gbl_datatypes.o state_info.o
file_io_dat.o parallel_dat.o mdin_ctrl_dat.o mdin_ewald_dat.o
prmtop_dat.o inpcrd_dat.o dynamics_dat.o img.o parallel.o pme_direct.o
pme_recip.o pme_fft.o fft1d.o bspline.o pme_force.o pbc.o nb_pairlist.o
cit.o dynamics.o bonds.o angles.o dihedrals.o runmd.o loadbal.o shake.o
runmin.o constraints.o axis_optimize.o gb_ene.o veclib.o gb_force.o
timers.o pmemd_lib.o runfiles.o file_io.o bintraj.o pmemd_clib.o pmemd.o
random.o degcnt.o erfcfun.o nmr_calls.o nmr_lib.o get_cmdline.o
master_setup.o alltasks_setup.o pme_setup.o ene_frc_splines.o
nextprmtop_section.o -L/mnt/data/cluster/intel/mkl/10.0.010/lib/64
-lmkl_ipf -lpthread -lmpi
-Wl,-rpath=/mnt/data/cluster/intel/ipp/5.3/em64t/sharedlib:/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t:/mnt/data/cluster/intel/fce/10.1.008/lib:/mnt/data/cluster/intel/cce/10.1.008/lib:/usr/local/torque/lib:/mnt/data/cluster/intel/ipp/5.3/em64t/sharedlib:/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t:/mnt/data/cluster/intel/fce/10.1.008/lib:/mnt/data/cluster/intel/cce/10.1.008/lib:/usr/lib64:/usr/local/lib64://usr/lib64/lib
ld: skipping incompatible /mnt/data/cluster/intel/mkl/10.0.010/lib/64/libmkl_intel_lp64.a when searching for libmkl_intel_lp64.a
ld:
skipping incompatible
/mnt/data/cluster/intel/mkl/10.0.010/lib/64/libmkl_intel_thread.a when
searching for libmkl_intel_thread.a
ld: skipping incompatible /mnt/data/cluster/intel/mkl/10.0.010/lib/64/libmkl_core.a when searching for libmkl_core.a
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o): In function
`mkl_vml_service_threader_z_1i_c_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x5a): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x131): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x156): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1b6): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1d4): undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x251):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o): In function
`L_mkl_vml_service_threader_z_1i_c_1o_2325__par_loop0_2.0':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x38c): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4ce): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_z_1i_2o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x59e): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x668): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x68d): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x6ea): undefined reference to
`__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x708): undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x782):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_z_1i_2o_2299__par_loop1_2.1':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x8c0): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x9ea): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_z_2i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xaac): undefined reference to
`__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xb76): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xb9b): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xbf8): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xc16): undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xc90):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_z_2i_1o_2273__par_loop2_2.2':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xdce): undefined reference to
`__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xef8): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_z_1i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0xfb2): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1074): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1099): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x10ff): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1116): undefined reference to
`__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x117c):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_z_1i_1o_2247__par_loop3_2.3':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x12a4): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x13bf): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_c_1i_c_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1476): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1544): undefined
reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1569): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x15c6): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x15e4):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x165e):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_c_1i_c_1o_2216__par_loop4_2.4':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1799): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x18ce): undefined reference to
`__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_c_1i_2o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1997): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1a5e): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1a7f): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1ad6): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1af4):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1b68): undefined reference to
`__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_c_1i_2o_2190__par_loop5_2.5':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1cab): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1de0): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_c_2i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1eab): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1f72): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1f93): undefined reference
to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x1fea): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2008):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x207c):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_c_2i_1o_2164__par_loop6_2.6':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x21bf): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x22f4): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o): In function
`mkl_vml_service_threader_c_1i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x23b4): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2476): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x249b): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2501): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2518):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x257e):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o): In function
`L_mkl_vml_service_threader_c_1i_1o_2138__par_loop7_2.7':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x26a6): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x27c1): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_d_1i_c_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x287c): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2947): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2968): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x29bf): undefined reference to
`__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x29dd):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2a51):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_d_1i_c_1o_2111__par_loop8_2.8':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2b96): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2ccb): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_d_1i_2o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2d9b): undefined
reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2e62): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2e83): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2eda): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2ef8):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x2f6c):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_d_1i_2o_2085__par_loop9_2.9':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x30af): undefined reference to
`__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x31e4): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_d_2i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x32af): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3376): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3397): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x33ee): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x340c): undefined reference to
`__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3480):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_d_2i_1o_2059__par_loop10_2.10':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x35c3): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x36f8): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_d_1i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x37b8): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x387a): undefined
reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x389f): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3905): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x391c):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3982):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_d_1i_1o_2033__par_loop11_2.11':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3aaa): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3bc5): undefined reference to
`__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_s_1i_c_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3c80): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3d48): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3d66): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3dbd): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3dd8):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3e46): undefined reference to
`__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function
`L_mkl_vml_service_threader_s_1i_c_1o_2002__par_loop12_2.12':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x3f8b): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x40c0): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_s_1i_2o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x418f): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4256): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4277): undefined
reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x42ce): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x42ec):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4360):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_s_1i_2o_1976__par_loop13_2.13':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x44a3): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x45d8): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o): In
function `mkl_vml_service_threader_s_2i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x46a3): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x476a): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x478b): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x47e2): undefined reference to `__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4800):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4874):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o): In function
`L_mkl_vml_service_threader_s_2i_1o_1950__par_loop14_2.14':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x49b7): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4aec): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_threader_s_1i_1o':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4bac): undefined reference to `__kmpc_global_thread_num'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4c6e): undefined reference to `__kmpc_ok_to_fork'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4c93): undefined reference to `__kmpc_push_num_threads'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4cf9): undefined reference to
`__kmpc_fork_call'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4d10):
undefined reference to `__kmpc_serialized_parallel'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4d76):
undefined reference to `__kmpc_end_serialized_parallel'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `L_mkl_vml_service_threader_s_1i_1o_1924__par_loop15_2.15':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4e9e): undefined reference to `__kmpc_for_static_init_4'
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x4fb9): undefined reference to `__kmpc_for_static_fini'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(vml_threading_templates.o):
In function `mkl_vml_service_openmp_get_num_procs':
_tmp/treading_linux32e_intel_thread/vml_threading_templates.c:(.text+0x5022): undefined
reference to `omp_get_num_procs'
/mnt/data/cluster/intel/mkl/10.0.010/lib/em64t/libmkl_intel_thread.a(mkl_threading.o): In function `MKL_Get_Max_Threads':
__tmp_mkl_threading.c:(.text+0x55): undefined reference to `omp_in_parallel'
__tmp_mkl_threading.c:(.text+0x77): undefined reference to `omp_get_max_threads'
make[1]: *** [pmemd] Error 1
make[1]: Leaving directory `/mnt/data1/application/amber9/src/pmemd/src'
make: *** [install] Error 2
Thank youVijay
Vijay Manickam Achari
(Phd Student c/o Prof Rauzah Hashim)
Chemistry Department,
University of Malaya,
Malaysia
vjramana.gmail.com
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Received on Tue Nov 15 2011 - 01:00:03 PST
