cd netcdf/src && make install make[1]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' Making install in f90 make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' /bin/sh ../libtool --mode=compile gfortran -I../libsrc -I. -O3 -c -o typeSizes.lo typeSizes.f90 gfortran -I../libsrc -I. -O3 -c typeSizes.f90 -o typeSizes.o /bin/sh ../libtool --mode=compile gfortran -I../libsrc -I. -O3 -c -o netcdf.lo netcdf.f90 gfortran -I../libsrc -I. -O3 -c netcdf.f90 -o netcdf.o /bin/sh ../libtool --mode=link gfortran -I../libsrc -I. -O3 -o libnetcdff90.la typeSizes.lo netcdf.lo mkdir .libs ar cru .libs/libnetcdff90.a typeSizes.o netcdf.o ranlib .libs/libnetcdff90.a creating libnetcdff90.la (cd .libs && rm -f libnetcdff90.la && ln -s ../libnetcdff90.la libnetcdff90.la) make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' make[3]: Nothing to be done for `install-exec-am'. test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" /usr/bin/install -c -m 644 './netcdf_f90.3' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3/netcdf_f90.3' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" /usr/bin/install -c -m 644 'typesizes.mod' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/typesizes.mod' /usr/bin/install -c -m 644 'netcdf.mod' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/netcdf.mod' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' Making install in fortran make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' depbase=`echo fort-attio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-attio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-attio.lo fort-attio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-attio.lo -MD -MP -MF .deps/fort-attio.Tpo -c fort-attio.c -o fort-attio.o depbase=`echo fort-control.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-control.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-control.lo fort-control.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-control.lo -MD -MP -MF .deps/fort-control.Tpo -c fort-control.c -o fort-control.o depbase=`echo fort-dim.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-dim.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-dim.lo fort-dim.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-dim.lo -MD -MP -MF .deps/fort-dim.Tpo -c fort-dim.c -o fort-dim.o depbase=`echo fort-genatt.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genatt.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-genatt.lo fort-genatt.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genatt.lo -MD -MP -MF .deps/fort-genatt.Tpo -c fort-genatt.c -o fort-genatt.o depbase=`echo fort-geninq.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-geninq.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-geninq.lo fort-geninq.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-geninq.lo -MD -MP -MF .deps/fort-geninq.Tpo -c fort-geninq.c -o fort-geninq.o depbase=`echo fort-genvar.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genvar.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-genvar.lo fort-genvar.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genvar.lo -MD -MP -MF .deps/fort-genvar.Tpo -c fort-genvar.c -o fort-genvar.o depbase=`echo fort-lib.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-lib.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-lib.lo fort-lib.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-lib.lo -MD -MP -MF .deps/fort-lib.Tpo -c fort-lib.c -o fort-lib.o depbase=`echo fort-misc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-misc.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-misc.lo fort-misc.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-misc.lo -MD -MP -MF .deps/fort-misc.Tpo -c fort-misc.c -o fort-misc.o depbase=`echo fort-v2compat.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-v2compat.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-v2compat.lo fort-v2compat.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-v2compat.lo -MD -MP -MF .deps/fort-v2compat.Tpo -c fort-v2compat.c -o fort-v2compat.o depbase=`echo fort-vario.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-vario.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-vario.lo fort-vario.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-vario.lo -MD -MP -MF .deps/fort-vario.Tpo -c fort-vario.c -o fort-vario.o depbase=`echo fort-var1io.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-var1io.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-var1io.lo fort-var1io.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-var1io.lo -MD -MP -MF .deps/fort-var1io.Tpo -c fort-var1io.c -o fort-var1io.o depbase=`echo fort-varaio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varaio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-varaio.lo fort-varaio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varaio.lo -MD -MP -MF .deps/fort-varaio.Tpo -c fort-varaio.c -o fort-varaio.o depbase=`echo fort-varmio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varmio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-varmio.lo fort-varmio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varmio.lo -MD -MP -MF .deps/fort-varmio.Tpo -c fort-varmio.c -o fort-varmio.o depbase=`echo fort-varsio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varsio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-varsio.lo fort-varsio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varsio.lo -MD -MP -MF .deps/fort-varsio.Tpo -c fort-varsio.c -o fort-varsio.o /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o libnetcdff.la fort-attio.lo fort-control.lo fort-dim.lo fort-genatt.lo fort-geninq.lo fort-genvar.lo fort-lib.lo fort-misc.lo fort-v2compat.lo fort-vario.lo fort-var1io.lo fort-varaio.lo fort-varmio.lo fort-varsio.lo ../f90/libnetcdff90.la mkdir .libs rm -fr .libs/libnetcdff.lax mkdir .libs/libnetcdff.lax rm -fr .libs/libnetcdff.lax/libnetcdff90.a mkdir .libs/libnetcdff.lax/libnetcdff90.a (cd .libs/libnetcdff.lax/libnetcdff90.a && ar x /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/src/netcdf/src/fortran/../f90/.libs/libnetcdff90.a) ar cru .libs/libnetcdff.a fort-attio.o fort-control.o fort-dim.o fort-genatt.o fort-geninq.o fort-genvar.o fort-lib.o fort-misc.o fort-v2compat.o fort-vario.o fort-var1io.o fort-varaio.o fort-varmio.o fort-varsio.o .libs/libnetcdff.lax/libnetcdff90.a/typeSizes.o .libs/libnetcdff.lax/libnetcdff90.a/netcdf.o ranlib .libs/libnetcdff.a rm -fr .libs/libnetcdff.lax creating libnetcdff.la (cd .libs && rm -f libnetcdff.la && ln -s ../libnetcdff.la libnetcdff.la) make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' cd .. && /bin/sh ./config.status fortran/nfconfig1.inc config.status: creating fortran/nfconfig1.inc make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" /usr/bin/install -c -m 644 'netcdf.inc' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/netcdf.inc' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" /usr/bin/install -c -m 644 './netcdf_f77.3' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3/netcdf_f77.3' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' Making install in libsrc make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' depbase=`echo attr.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT attr.lo -MD -MP -MF "$depbase.Tpo" -c -o attr.lo attr.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT attr.lo -MD -MP -MF .deps/attr.Tpo -c attr.c -o attr.o depbase=`echo ncx.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT ncx.lo -MD -MP -MF "$depbase.Tpo" -c -o ncx.lo ncx.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT ncx.lo -MD -MP -MF .deps/ncx.Tpo -c ncx.c -o ncx.o depbase=`echo putget.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT putget.lo -MD -MP -MF "$depbase.Tpo" -c -o putget.lo putget.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT putget.lo -MD -MP -MF .deps/putget.Tpo -c putget.c -o putget.o depbase=`echo dim.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT dim.lo -MD -MP -MF "$depbase.Tpo" -c -o dim.lo dim.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT dim.lo -MD -MP -MF .deps/dim.Tpo -c dim.c -o dim.o depbase=`echo error.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT error.lo -MD -MP -MF "$depbase.Tpo" -c -o error.lo error.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT error.lo -MD -MP -MF .deps/error.Tpo -c error.c -o error.o depbase=`echo libvers.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT libvers.lo -MD -MP -MF "$depbase.Tpo" -c -o libvers.lo libvers.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT libvers.lo -MD -MP -MF .deps/libvers.Tpo -c libvers.c -o libvers.o depbase=`echo nc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT nc.lo -MD -MP -MF "$depbase.Tpo" -c -o nc.lo nc.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT nc.lo -MD -MP -MF .deps/nc.Tpo -c nc.c -o nc.o depbase=`echo string.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT string.lo -MD -MP -MF "$depbase.Tpo" -c -o string.lo string.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT string.lo -MD -MP -MF .deps/string.Tpo -c string.c -o string.o depbase=`echo v1hpg.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT v1hpg.lo -MD -MP -MF "$depbase.Tpo" -c -o v1hpg.lo v1hpg.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT v1hpg.lo -MD -MP -MF .deps/v1hpg.Tpo -c v1hpg.c -o v1hpg.o depbase=`echo var.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT var.lo -MD -MP -MF "$depbase.Tpo" -c -o var.lo var.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT var.lo -MD -MP -MF .deps/var.Tpo -c var.c -o var.o depbase=`echo posixio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT posixio.lo -MD -MP -MF "$depbase.Tpo" -c -o posixio.lo posixio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT posixio.lo -MD -MP -MF .deps/posixio.Tpo -c posixio.c -o posixio.o depbase=`echo v2i.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT v2i.lo -MD -MP -MF "$depbase.Tpo" -c -o v2i.lo v2i.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT v2i.lo -MD -MP -MF .deps/v2i.Tpo -c v2i.c -o v2i.o /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o libnetcdf2.la v2i.lo mkdir .libs ar cru .libs/libnetcdf2.a v2i.o ranlib .libs/libnetcdf2.a creating libnetcdf2.la (cd .libs && rm -f libnetcdf2.la && ln -s ../libnetcdf2.la libnetcdf2.la) /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o libnetcdf.la -rpath /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib -version-info 4:0:0 -no-undefined attr.lo ncx.lo putget.lo dim.lo error.lo libvers.lo nc.lo string.lo v1hpg.lo var.lo posixio.lo libnetcdf2.la ../fortran/libnetcdff.la rm -fr .libs/libnetcdf.lax mkdir .libs/libnetcdf.lax rm -fr .libs/libnetcdf.lax/libnetcdf2.a mkdir .libs/libnetcdf.lax/libnetcdf2.a (cd .libs/libnetcdf.lax/libnetcdf2.a && ar x /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/src/netcdf/src/libsrc/./.libs/libnetcdf2.a) rm -fr .libs/libnetcdf.lax/libnetcdff.a mkdir .libs/libnetcdf.lax/libnetcdff.a (cd .libs/libnetcdf.lax/libnetcdff.a && ar x /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/src/netcdf/src/libsrc/../fortran/.libs/libnetcdff.a) ar cru .libs/libnetcdf.a attr.o ncx.o putget.o dim.o error.o libvers.o nc.o string.o v1hpg.o var.o posixio.o .libs/libnetcdf.lax/libnetcdf2.a/v2i.o .libs/libnetcdf.lax/libnetcdff.a/fort-attio.o .libs/libnetcdf.lax/libnetcdff.a/fort-control.o .libs/libnetcdf.lax/libnetcdff.a/fort-dim.o .libs/libnetcdf.lax/libnetcdff.a/fort-genatt.o .libs/libnetcdf.lax/libnetcdff.a/fort-geninq.o .libs/libnetcdf.lax/libnetcdff.a/fort-genvar.o .libs/libnetcdf.lax/libnetcdff.a/fort-lib.o .libs/libnetcdf.lax/libnetcdff.a/fort-misc.o .libs/libnetcdf.lax/libnetcdff.a/fort-v2compat.o .libs/libnetcdf.lax/libnetcdff.a/fort-vario.o .libs/libnetcdf.lax/libnetcdff.a/fort-var1io.o .libs/libnetcdf.lax/libnetcdff.a/fort-varaio.o .libs/libnetcdf.lax/libnetcdff.a/fort-varmio.o .libs/libnetcdf.lax/libnetcdff.a/fort-varsio.o .libs/libnetcdf.lax/libnetcdff.a/typeSizes.o .libs/libnetcdf.lax/libnetcdff.a/netcdf.o ranlib .libs/libnetcdf.a rm -fr .libs/libnetcdf.lax creating libnetcdf.la (cd .libs && rm -f libnetcdf.la && ln -s ../libnetcdf.la libnetcdf.la) make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" /bin/sh ../libtool --mode=install /usr/bin/install -c 'libnetcdf.la' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.la' /usr/bin/install -c .libs/libnetcdf.lai /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.la /usr/bin/install -c .libs/libnetcdf.a /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.a chmod 644 /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.a ranlib /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.a PATH="$PATH:/sbin" ldconfig -n /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib ---------------------------------------------------------------------- Libraries have been installed in: /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the `-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the `LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the `LD_RUN_PATH' environment variable during linking - use the `-Wl,--rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to `/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" /usr/bin/install -c -m 644 'netcdf.h' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/netcdf.h' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" /usr/bin/install -c -m 644 './netcdf.3' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3/netcdf.3' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' Making install in nctest make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' Making install in ncgen make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' depbase=`echo main.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I.. -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT main.o -MD -MP -MF "$depbase.Tpo" -c -o main.o main.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo load.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I.. -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT load.o -MD -MP -MF "$depbase.Tpo" -c -o load.o load.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo ncgentab.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I.. -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT ncgentab.o -MD -MP -MF "$depbase.Tpo" -c -o ncgentab.o ncgentab.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo escapes.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I.. -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT escapes.o -MD -MP -MF "$depbase.Tpo" -c -o escapes.o escapes.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo getfill.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I.. -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT getfill.o -MD -MP -MF "$depbase.Tpo" -c -o getfill.o getfill.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo init.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I.. -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT init.o -MD -MP -MF "$depbase.Tpo" -c -o init.o init.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo genlib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I.. -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT genlib.o -MD -MP -MF "$depbase.Tpo" -c -o genlib.o genlib.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncgen main.o load.o ncgentab.o escapes.o getfill.o init.o genlib.o ../libsrc/libnetcdf.la mkdir .libs gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncgen main.o load.o ncgentab.o escapes.o getfill.o init.o genlib.o ../libsrc/.libs/libnetcdf.a make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" /bin/sh ../libtool --mode=install /usr/bin/install -c 'ncgen' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncgen' /usr/bin/install -c ncgen /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncgen test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" /usr/bin/install -c -m 644 './ncgen.1' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1/ncgen.1' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' Making install in ncdump make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' depbase=`echo ncdump.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT ncdump.o -MD -MP -MF "$depbase.Tpo" -c -o ncdump.o ncdump.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo vardata.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT vardata.o -MD -MP -MF "$depbase.Tpo" -c -o vardata.o vardata.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi depbase=`echo dumplib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`; \ if gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../fortran -I../libsrc -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT dumplib.o -MD -MP -MF "$depbase.Tpo" -c -o dumplib.o dumplib.c; \ then mv -f "$depbase.Tpo" "$depbase.Po"; else rm -f "$depbase.Tpo"; exit 1; fi /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncdump ncdump.o vardata.o dumplib.o -lm ../libsrc/libnetcdf.la mkdir .libs gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncdump ncdump.o vardata.o dumplib.o -lm ../libsrc/.libs/libnetcdf.a make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" /bin/sh ../libtool --mode=install /usr/bin/install -c 'ncdump' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncdump' /usr/bin/install -c ncdump /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncdump test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" /usr/bin/install -c -m 644 './ncdump.1' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1/ncdump.1' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' Making install in nf_test make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' Making install in nc_test make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' Making install in examples make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' Making install in C make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' Making install in CDL make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' Making install in F77 make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' Making install in F90 make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make install-am make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[5]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[3]: Nothing to be done for `install-exec-am'. make install-data-hook make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' +-------------------------------------------------------------+ | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | NetCDF is tested nightly on many platforms at Unidata | | but your platform is probably different in some ways. | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[1]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' Starting installation of Amber11 (parallel) at Tue Sep 13 21:30:05 EEST 2011. cd sander && make parallel make[1]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/src/sander' cd ../../AmberTools/src/netcdf/src && make install make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' Making install in f90 make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' make[4]: Nothing to be done for `install-exec-am'. test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" /usr/bin/install -c -m 644 './netcdf_f90.3' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3/netcdf_f90.3' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" /usr/bin/install -c -m 644 'typesizes.mod' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/typesizes.mod' /usr/bin/install -c -m 644 'netcdf.mod' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/netcdf.mod' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/f90' Making install in fortran make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' depbase=`echo fort-attio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-attio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-attio.lo fort-attio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-attio.lo -MD -MP -MF .deps/fort-attio.Tpo -c fort-attio.c -o fort-attio.o depbase=`echo fort-control.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-control.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-control.lo fort-control.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-control.lo -MD -MP -MF .deps/fort-control.Tpo -c fort-control.c -o fort-control.o depbase=`echo fort-dim.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-dim.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-dim.lo fort-dim.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-dim.lo -MD -MP -MF .deps/fort-dim.Tpo -c fort-dim.c -o fort-dim.o depbase=`echo fort-genatt.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genatt.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-genatt.lo fort-genatt.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genatt.lo -MD -MP -MF .deps/fort-genatt.Tpo -c fort-genatt.c -o fort-genatt.o depbase=`echo fort-geninq.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-geninq.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-geninq.lo fort-geninq.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-geninq.lo -MD -MP -MF .deps/fort-geninq.Tpo -c fort-geninq.c -o fort-geninq.o depbase=`echo fort-genvar.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genvar.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-genvar.lo fort-genvar.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-genvar.lo -MD -MP -MF .deps/fort-genvar.Tpo -c fort-genvar.c -o fort-genvar.o depbase=`echo fort-lib.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-lib.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-lib.lo fort-lib.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-lib.lo -MD -MP -MF .deps/fort-lib.Tpo -c fort-lib.c -o fort-lib.o depbase=`echo fort-misc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-misc.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-misc.lo fort-misc.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-misc.lo -MD -MP -MF .deps/fort-misc.Tpo -c fort-misc.c -o fort-misc.o depbase=`echo fort-v2compat.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-v2compat.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-v2compat.lo fort-v2compat.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-v2compat.lo -MD -MP -MF .deps/fort-v2compat.Tpo -c fort-v2compat.c -o fort-v2compat.o depbase=`echo fort-vario.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-vario.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-vario.lo fort-vario.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-vario.lo -MD -MP -MF .deps/fort-vario.Tpo -c fort-vario.c -o fort-vario.o depbase=`echo fort-var1io.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-var1io.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-var1io.lo fort-var1io.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-var1io.lo -MD -MP -MF .deps/fort-var1io.Tpo -c fort-var1io.c -o fort-var1io.o depbase=`echo fort-varaio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varaio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-varaio.lo fort-varaio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varaio.lo -MD -MP -MF .deps/fort-varaio.Tpo -c fort-varaio.c -o fort-varaio.o depbase=`echo fort-varmio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varmio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-varmio.lo fort-varmio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varmio.lo -MD -MP -MF .deps/fort-varmio.Tpo -c fort-varmio.c -o fort-varmio.o depbase=`echo fort-varsio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; \ if /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varsio.lo -MD -MP -MF "$depbase.Tpo" -c -o fort-varsio.lo fort-varsio.c; \ then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f "$depbase.Tpo"; exit 1; fi gcc -DHAVE_CONFIG_H -I. -I. -I.. -I. -I../libsrc -DNDEBUG -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -MT fort-varsio.lo -MD -MP -MF .deps/fort-varsio.Tpo -c fort-varsio.c -o fort-varsio.o /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o libnetcdff.la fort-attio.lo fort-control.lo fort-dim.lo fort-genatt.lo fort-geninq.lo fort-genvar.lo fort-lib.lo fort-misc.lo fort-v2compat.lo fort-vario.lo fort-var1io.lo fort-varaio.lo fort-varmio.lo fort-varsio.lo ../f90/libnetcdff90.la rm -fr .libs/libnetcdff.a .libs/libnetcdff.la rm -fr .libs/libnetcdff.lax mkdir .libs/libnetcdff.lax rm -fr .libs/libnetcdff.lax/libnetcdff90.a mkdir .libs/libnetcdff.lax/libnetcdff90.a (cd .libs/libnetcdff.lax/libnetcdff90.a && ar x /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran/../f90/.libs/libnetcdff90.a) ar cru .libs/libnetcdff.a fort-attio.o fort-control.o fort-dim.o fort-genatt.o fort-geninq.o fort-genvar.o fort-lib.o fort-misc.o fort-v2compat.o fort-vario.o fort-var1io.o fort-varaio.o fort-varmio.o fort-varsio.o .libs/libnetcdff.lax/libnetcdff90.a/typeSizes.o .libs/libnetcdff.lax/libnetcdff90.a/netcdf.o ranlib .libs/libnetcdff.a rm -fr .libs/libnetcdff.lax creating libnetcdff.la (cd .libs && rm -f libnetcdff.la && ln -s ../libnetcdff.la libnetcdff.la) make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" /usr/bin/install -c -m 644 'netcdf.inc' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/netcdf.inc' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" /usr/bin/install -c -m 644 './netcdf_f77.3' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3/netcdf_f77.3' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/fortran' Making install in libsrc make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o libnetcdf.la -rpath /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib -version-info 4:0:0 -no-undefined attr.lo ncx.lo putget.lo dim.lo error.lo libvers.lo nc.lo string.lo v1hpg.lo var.lo posixio.lo libnetcdf2.la ../fortran/libnetcdff.la rm -fr .libs/libnetcdf.a .libs/libnetcdf.la .libs/libnetcdf.lai rm -fr .libs/libnetcdf.lax mkdir .libs/libnetcdf.lax rm -fr .libs/libnetcdf.lax/libnetcdf2.a mkdir .libs/libnetcdf.lax/libnetcdf2.a (cd .libs/libnetcdf.lax/libnetcdf2.a && ar x /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc/./.libs/libnetcdf2.a) rm -fr .libs/libnetcdf.lax/libnetcdff.a mkdir .libs/libnetcdf.lax/libnetcdff.a (cd .libs/libnetcdf.lax/libnetcdff.a && ar x /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc/../fortran/.libs/libnetcdff.a) ar cru .libs/libnetcdf.a attr.o ncx.o putget.o dim.o error.o libvers.o nc.o string.o v1hpg.o var.o posixio.o .libs/libnetcdf.lax/libnetcdf2.a/v2i.o .libs/libnetcdf.lax/libnetcdff.a/fort-attio.o .libs/libnetcdf.lax/libnetcdff.a/fort-control.o .libs/libnetcdf.lax/libnetcdff.a/fort-dim.o .libs/libnetcdf.lax/libnetcdff.a/fort-genatt.o .libs/libnetcdf.lax/libnetcdff.a/fort-geninq.o .libs/libnetcdf.lax/libnetcdff.a/fort-genvar.o .libs/libnetcdf.lax/libnetcdff.a/fort-lib.o .libs/libnetcdf.lax/libnetcdff.a/fort-misc.o .libs/libnetcdf.lax/libnetcdff.a/fort-v2compat.o .libs/libnetcdf.lax/libnetcdff.a/fort-vario.o .libs/libnetcdf.lax/libnetcdff.a/fort-var1io.o .libs/libnetcdf.lax/libnetcdff.a/fort-varaio.o .libs/libnetcdf.lax/libnetcdff.a/fort-varmio.o .libs/libnetcdf.lax/libnetcdff.a/fort-varsio.o .libs/libnetcdf.lax/libnetcdff.a/typeSizes.o .libs/libnetcdf.lax/libnetcdff.a/netcdf.o ranlib .libs/libnetcdf.a rm -fr .libs/libnetcdf.lax creating libnetcdf.la (cd .libs && rm -f libnetcdf.la && ln -s ../libnetcdf.la libnetcdf.la) make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib" /bin/sh ../libtool --mode=install /usr/bin/install -c 'libnetcdf.la' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.la' /usr/bin/install -c .libs/libnetcdf.lai /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.la /usr/bin/install -c .libs/libnetcdf.a /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.a chmod 644 /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.a ranlib /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib/libnetcdf.a PATH="$PATH:/sbin" ldconfig -n /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib ---------------------------------------------------------------------- Libraries have been installed in: /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the `-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the `LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the `LD_RUN_PATH' environment variable during linking - use the `-Wl,--rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to `/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include" /usr/bin/install -c -m 644 'netcdf.h' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/include/netcdf.h' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3" /usr/bin/install -c -m 644 './netcdf.3' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man3/netcdf.3' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/libsrc' Making install in nctest make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nctest' Making install in ncgen make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncgen main.o load.o ncgentab.o escapes.o getfill.o init.o genlib.o ../libsrc/libnetcdf.la gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncgen main.o load.o ncgentab.o escapes.o getfill.o init.o genlib.o ../libsrc/.libs/libnetcdf.a make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" /bin/sh ../libtool --mode=install /usr/bin/install -c 'ncgen' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncgen' /usr/bin/install -c ncgen /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncgen test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" /usr/bin/install -c -m 644 './ncgen.1' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1/ncgen.1' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncgen' Making install in ncdump make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' /bin/sh ../libtool --tag=CC --mode=link gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncdump ncdump.o vardata.o dumplib.o -lm ../libsrc/libnetcdf.la gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncdump ncdump.o vardata.o dumplib.o -lm ../libsrc/.libs/libnetcdf.a make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin" /bin/sh ../libtool --mode=install /usr/bin/install -c 'ncdump' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncdump' /usr/bin/install -c ncdump /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/bin/ncdump test -z "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" || mkdir -p -- "/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1" /usr/bin/install -c -m 644 './ncdump.1' '/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/share/man/man1/ncdump.1' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/ncdump' Making install in nf_test make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nf_test' Making install in nc_test make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/nc_test' Making install in examples make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' Making install in C make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' make[5]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/C' Making install in CDL make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' make[5]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/CDL' Making install in F77 make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' make[5]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F77' Making install in F90 make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make install-am make[5]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[6]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[5]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples/F90' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[5]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src/examples' make[3]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[4]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[4]: Nothing to be done for `install-exec-am'. make install-data-hook make[5]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' +-------------------------------------------------------------+ | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | NetCDF is tested nightly on many platforms at Unidata | | but your platform is probably different in some ways. | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[5]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[4]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[3]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/netcdf/src' cp ../../AmberTools/src/netcdf/include/*.mod . cp ../../AmberTools/src/netcdf/bin/ncdump /shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/bin cpp -traditional -P -DBINTRAJ -DMPI -I/include constants.f > _constants.f mpixlf90 -c -O3 -ffree-form -o constants.o _constants.f ** constants === End of Compilation 1 === 1501-510 Compilation successful for file _constants.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include state.f > _state.f mpixlf90 -c -O3 -ffree-form -o state.o _state.f ** state === End of Compilation 1 === 1501-510 Compilation successful for file _state.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include memory_module.f > _memory_module.f mpixlf90 -c -O0 -ffree-form -o memory_module.o _memory_module.f ** memory_module === End of Compilation 1 === 1501-510 Compilation successful for file _memory_module.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include stack.f > _stack.f mpixlf90 -c -O3 -ffree-form -o stack.o _stack.f ** stack === End of Compilation 1 === 1501-510 Compilation successful for file _stack.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include nose_hoover.f > _nose_hoover.f mpixlf90 -c -O3 -ffree-form -o nose_hoover.o _nose_hoover.f ** nose_hoover_module === End of Compilation 1 === "_nose_hoover.f", 1500-036 (I) The NOSTRICT option (default at OPT(3)) has the potential to alter the semantics of a program. Please refer to documentation on the STRICT/NOSTRICT option for more information. 1501-510 Compilation successful for file _nose_hoover.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include nose_hoover_vars.f > _nose_hoover_vars.f mpixlf90 -c -O0 -ffree-form -o nose_hoover_vars.o _nose_hoover_vars.f ** nose_hoover_vars === End of Compilation 1 === 1501-510 Compilation successful for file _nose_hoover_vars.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include pimd_vars.f > _pimd_vars.f mpixlf90 -c -O0 -ffree-form -o pimd_vars.o _pimd_vars.f ** pimd_vars === End of Compilation 1 === ** full_pimd_vars === End of Compilation 2 === ** part_pimd_vars === End of Compilation 3 === ** neb_vars === End of Compilation 4 === 1501-510 Compilation successful for file _pimd_vars.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include cmd_vars.f > _cmd_vars.f mpixlf90 -c -O0 -ffree-form -o cmd_vars.o _cmd_vars.f ** cmd_vars === End of Compilation 1 === 1501-510 Compilation successful for file _cmd_vars.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include nose_hoover_init.f > _nose_hoover_init.f mpixlf90 -c -O0 -ffree-form -o nose_hoover_init.o _nose_hoover_init.f ** nose_hoover_init === End of Compilation 1 === 1501-510 Compilation successful for file _nose_hoover_init.f. cd ../../AmberTools/src/sqm && make qmmm_qmtheorymodule.o make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/sqm' cpp -traditional -P -DBINTRAJ -DMPI -I/include constants.f > _constants.f mpif90 -c -O3 -ffree-form -o constants.o _constants.f cpp -traditional -P -DBINTRAJ -DMPI -I/include qmmm_qmtheorymodule.f > _qmmm_qmtheorymodule.f mpif90 -c -O0 -ffree-form -o qmmm_qmtheorymodule.o _qmmm_qmtheorymodule.f make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/sqm' cp ../../AmberTools/src/sqm/qmmm_qmtheorymodule.mod . cp ../../AmberTools/src/sqm/qmmm_qmtheorymodule.o . cd ../../AmberTools/src/sqm && make qmmm_module.o make[2]: Entering directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/sqm' cpp -traditional -P -DBINTRAJ -DMPI -I/include qmmm_module.f > _qmmm_module.f mpif90 -c -O3 -ffree-form -o qmmm_module.o _qmmm_module.f make[2]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/AmberTools/src/sqm' cp ../../AmberTools/src/sqm/qmmm_module.mod . cp ../../AmberTools/src/sqm/qmmm_module.o . cpp -traditional -P -DBINTRAJ -DMPI -I/include trace.f > _trace.f mpixlf90 -c -O0 -ffree-form -o trace.o _trace.f ** trace === End of Compilation 1 === 1501-510 Compilation successful for file _trace.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include lmod.f > _lmod.f mpixlf90 -c -O0 -ffree-form -o lmod.o _lmod.f ** lmod_driver === End of Compilation 1 === 1501-510 Compilation successful for file _lmod.f. mpixlc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DMPI -I/include -c -o rand2.o ../../AmberTools/src/sff/rand2.c mpixlc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DMPI -I/include -DSQM -c -o lmodC.o ../../AmberTools/src/sff/lmodC.c mpixlc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DMPI -I/include -DSQM -c -o xminC.o ../../AmberTools/src/sff/xminC.c cpp -traditional -P -DBINTRAJ -DMPI -I/include findmask.f > _findmask.f mpixlf90 -c -O0 -ffree-form -o findmask.o _findmask.f ** findmask === End of Compilation 1 === 1501-510 Compilation successful for file _findmask.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include parms.f > _parms.f mpixlf90 -c -O3 -ffree-form -o parms.o _parms.f ** parms === End of Compilation 1 === 1501-510 Compilation successful for file _parms.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include softcore.f > _softcore.f mpixlf90 -c -O3 -ffree-form -o softcore.o _softcore.f ** softcore === End of Compilation 1 === "_softcore.f", 1500-036 (I) The NOSTRICT option (default at OPT(3)) has the potential to alter the semantics of a program. Please refer to documentation on the STRICT/NOSTRICT option for more information. 1501-510 Compilation successful for file _softcore.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include decomp.f > _decomp.f mpixlf90 -c -O3 -ffree-form -o decomp.o _decomp.f ** decomp === End of Compilation 1 === "_decomp.f", 1500-036 (I) The NOSTRICT option (default at OPT(3)) has the potential to alter the semantics of a program. Please refer to documentation on the STRICT/NOSTRICT option for more information. 1501-510 Compilation successful for file _decomp.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include icosasurf.f > _icosasurf.f mpixlf90 -c -O3 -ffree-form -o icosasurf.o _icosasurf.f ** icosasurf === End of Compilation 1 === "_icosasurf.f", 1500-036 (I) The NOSTRICT option (default at OPT(3)) has the potential to alter the semantics of a program. Please refer to documentation on the STRICT/NOSTRICT option for more information. 1501-510 Compilation successful for file _icosasurf.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-constants.f > _ncsu-constants.f mpixlf90 -c -O0 -ffree-form -o ncsu-constants.o _ncsu-constants.f ** ncsu_constants === End of Compilation 1 === 1501-510 Compilation successful for file _ncsu-constants.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-colvar-type.f > _ncsu-colvar-type.f mpixlf90 -c -O3 -ffree-form -o ncsu-colvar-type.o _ncsu-colvar-type.f ** ncsu_colvar_type === End of Compilation 1 === 1501-510 Compilation successful for file _ncsu-colvar-type.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-sander-proxy.f > _ncsu-sander-proxy.f mpixlf90 -c -O0 -ffree-form -o ncsu-sander-proxy.o _ncsu-sander-proxy.f ** ncsu_sander_proxy === End of Compilation 1 === 1501-510 Compilation successful for file _ncsu-sander-proxy.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-utils.f > _ncsu-utils.f mpixlf90 -c -O0 -ffree-form -o ncsu-utils.o _ncsu-utils.f ** ncsu_utils === End of Compilation 1 === 1501-510 Compilation successful for file _ncsu-utils.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-colvar-math.f > _ncsu-colvar-math.f mpixlf90 -c -O3 -ffree-form -o ncsu-colvar-math.o _ncsu-colvar-math.f ** ncsu_colvar_math === End of Compilation 1 === "_ncsu-colvar-math.f", 1500-036 (I) The NOSTRICT option (default at OPT(3)) has the potential to alter the semantics of a program. Please refer to documentation on the STRICT/NOSTRICT option for more information. 1501-510 Compilation successful for file _ncsu-colvar-math.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-colvar-utils.f > _ncsu-colvar-utils.f mpixlf90 -c -O0 -ffree-form -o ncsu-colvar-utils.o _ncsu-colvar-utils.f ** ncsu_colvar_utils === End of Compilation 1 === 1501-510 Compilation successful for file _ncsu-colvar-utils.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-cv-ANGLE.f > _ncsu-cv-ANGLE.f mpixlf90 -c -O3 -ffree-form -o ncsu-cv-ANGLE.o _ncsu-cv-ANGLE.f ** ncsu_cv_angle === End of Compilation 1 === 1501-510 Compilation successful for file _ncsu-cv-ANGLE.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include ncsu-cv-TORSION.f > _ncsu-cv-TORSION.f mpixlf90 -c -O3 -ffree-form -o ncsu-cv-TORSION.o _ncsu-cv-TORSION.f ** ncsu_cv_torsion === End of Compilation 1 === 1501-510 Compilation successful for file _ncsu-cv-TORSION.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include amoeba_mdin.f > _amoeba_mdin.f mpixlf90 -c -O0 -ffree-form -o amoeba_mdin.o _amoeba_mdin.f ** amoeba_mdin === End of Compilation 1 === 1501-510 Compilation successful for file _amoeba_mdin.f. cpp -traditional -P -DBINTRAJ -DMPI -I/include nonbond_list.f > _nonbond_list.f mpixlf90 -c -O3 -ffree-form -o nonbond_list.o _nonbond_list.f "_nonbond_list.f", line 1951.8: 1514-220 (S) Module symbol file for module qmmm_module is in a format not recognized by this compiler. Please compile the module with this compiler. 1501-511 Compilation failed for file _nonbond_list.f. make[1]: *** [nonbond_list.o] Error 1 make[1]: Leaving directory `/shared1/vgancheva/GaroGarabedyan-Amber/amberscalasca/src/sander' make: *** [parallel] Error 2