| MDOUT: prod4.out
|INPCRD: prod3.rst
|  PARM: protein_wat.parm7
|RESTRT: prod4.rst
|  REFC: refc
| MDVEL: mdvel
|  MDEN: mden
| MDCRD: prod4.crd
|MDINFO: mdinfo
|INPDIP: inpdip
|RSTDIP: rstdip


 Here is the input file:

Constant pressure constant temperature equilibration stage 2
&cntrl
 imin = 0,
 irest = 1,
 ntx=7,
 ntb=2,
 ntp = 1,
 taup = 2.0,
 cut = 10,
 ig = 209822,
 ntc = 2,
 ntf = 2,
 tempi = 300,
 temp0 = 300,
 ntt = 3,
 gamma_ln = 1.0,
 nstlim =25000000, dt = 0.002,
 ntpr =2500, ntwx = 2500, ntwr = 5000
 /

--------------------------------------------------------------------------------
   1.  RESOURCE   USE:
--------------------------------------------------------------------------------

| Flags: MPI
 getting new box info from bottom of inpcrd
|  INFO: Old style inpcrd file read