Dear Sindhikara
Hi
In my case, I didn't change the configure.
I made the link gcc >x86_64-aple-drawin10-gcc-4.5.3
g++>x86_64-aple-drawin10-g++-mp-4.5
gfortran>x86_64-aple-drawin10-gfortran-
mp-4.5
If you did the following method
>>>>>>>> cp ~/netcdf-4.1.3.tar .
>>>>>>>> mv netcdf netcdf_old
>>>>>>>> mkdir netcdf
>>>>>>>> cd netcdf
>>>>>>>> tar -xvf ../netcdf-4.1.3.tar
>>>>>>>> mv netcdf-4.1.3/ src
,you don't have to change the configure.
If you have the problem in the netcdf,plase make configure in your
netcdf directory.
Good luck......
Takeshi
On 2011/07/26, at 18:41, Daniel Sindhikara wrote:
> Jason,
> Thanks, yes that did fix *that* problem (despite it not making
> sense).
>
> Takeshi, you gave instructions on each step but have a modified
> version of
> configure and a separate netcdf. What is different about the
> configure and
> netcdf? About 'linking gcc45', did you only link gcc45 or also
> gfortran and
> g++?
>
> --Dan
>
> On Tue, Jul 26, 2011 at 10:32 AM, Jason Swails
> <jason.swails.gmail.com>wrote:
>
>> Try configuring with -nopython. It should still be able to run the
>> Python
>> programs there.
>>
>> However, I haven't had issues building Python on my Mac. It should
>> use the
>> Xcode GCC by default. I haven't followed the thread long enough,
>> but I can
>> look into it more in a week or so.
>>
>> HTH,
>> Jason
>>
>> --
>> Jason M. Swails
>> Quantum Theory Project,
>> University of Florida
>> Ph.D. Candidate
>> 352-392-4032
>>
>> On Jul 25, 2011, at 3:10 AM, Daniel Sindhikara <sindhikara.gmail.com>
>> wrote:
>>
>>> Takeshi,
>>> It took a while to reply, sorry about that. I understand that it
>>> worked
>>> for you but I'm still getting the same permissions error when I
>>> try to
>>> install. I am using gcc 4.5 from macports, but I still don't see
>>> how that
>> is
>>> related to the python permissions error. In your workflow I don't
>>> see
>>> anything about python. Are you saying I should replace the python
>>> 2.6.6
>>> directory with 2.6?
>>> -Dan
>>>
>>> 2011/7/14 Takeshi Baba <tbaba.cheng.es.osaka-u.ac.jp>
>>>
>>>> Now I tried to install amber11 on the Mac OS10.6.8
>>>>
>>>>
>>>> Before installing amber11, I got gcc45 from Macports and make a
>>>> link
>>>>
>>>>>>>> My method to install amber11
>>>>>>>> ===============================
>>>>>>>> patch -p0 -N < bugfix.all.A.txt (AmberTool bug fix)
>>>>>>>> cd AmberTools/src
>>>>>>>> cp ~/netcdf-4.1.3.tar .
>>>>>>>> mv netcdf netcdf_old
>>>>>>>> mkdir netcdf
>>>>>>>> cd netcdf
>>>>>>>> tar -xvf ../netcdf-4.1.3.tar
>>>>>>>> mv netcdf-4.1.3/ src
>>>>>>>> cd ../
>>>>>>>> ./configure.tbaba -macAccelerate gnu
>>>>>>>> make install
>>>>>>>> cd ../../
>>>>>>>> patch -p0 -N < ../bugfix.all_11.txt
>>>>>>>> ./AT15_Amber11.py
>>>>>>>> cd src
>>>>>>>> make serial
>>>>>>>>
>>>>>>>>
>>>>>>>> ===============================
>>>>>>
>>>>
>>>>
>>>> I succeeded in installing amber11 (serial)
>>>>
>>>> *My machine is iMac .
>>>>
>>>> If you have a time you should start from the following command.
>>>>
>>>> tar xvfj AmberToos-1.5.tar.bz2
>>>>
>>>>
>>>> Good luck
>>>>
>>>> Takeshi Baba
>>>>
>>>> On 2011/07/14, at 11:44, Daniel Sindhikara wrote:
>>>>
>>>>> I'm not sure what you mean here. Python 2.6.6 is included in the
>>>>> ambertools
>>>>> tarball.
>>>>> Are you saying I should replace it with a different version?
>>>>>
>>>>>
>>>>> 2011/7/13 Takeshi Baba <tbaba.cheng.es.osaka-u.ac.jp>
>>>>>
>>>>>> Hi
>>>>>> you check the python in your configure.
>>>>>> I think you should use gcc4.2 to install Python2.6 in the
>>>>>> amber11.
>>>>>>
>>>>>> when you make clean in the ambertools, Python2.6.6 is removed.
>>>>>> So you try to start to unzip ambertools again.
>>>>>>
>>>>>> If you get something wrong or same problems,
>>>>>> please give me a mail
>>>>>>
>>>>>> good luck.
>>>>>>
>>>>>> Takeshi Baba
>>>>>> On 2011/07/13, at 20:01, Daniel Sindhikara wrote:
>>>>>>
>>>>>>> Thanks all for the help so far, but..
>>>>>>> A few points:
>>>>>>> 1) It is AT 1.5
>>>>>>> 2) I did apply the bugfix.
>>>>>>> 3) Under dac's warning, I reinstalled from scratch into a non
>>>>>>> "root"
>>>>>>> directory
>>>>>>> 4) Now I have a new problem. If I unzip ambertools, patch, ./
>>>>>>> configure
>>>>>>> -macAccelerate gnu, then make install, I get a permissions
>>>>>>> problem.
>>>>>>> Part of
>>>>>>> the python install wants to write to my /Applications/..
>>>>>>> directory
>>>>>>>
>>>>>>> Considering I'm rebuilding from scratch (I completely removed my
>>>>>>> previous
>>>>>>> installation) I don't see where the problem is coming from
>>>>>>> unless I
>>>>>>> caused
>>>>>>> some damage with my previous sudo usage.
>>>>>>>
>>>>>>> Appreciate any ideas...
>>>>>>>
>>>>>>> ...
>>>>>>> /usr/bin/install -c -s ../python.exe
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/Python.framework/
>>>>>>> Versions/2.6/
>>>>>>> Resources/Python.app/Contents/MacOS/Python"
>>>>>>> sed -e "s!%bundleid%!org.python.python!g" \
>>>>>>> -e
>>>>>>> "s!%version%!`DYLD_FRAMEWORK_PATH=/Users/sindhikara/MyPrograms/
>>>>>>> amber11/AmberTools/src/etc/Python-2.6.6:
>>>>>>> ../python.exe \
>>>>>>> -c 'import platform; print(platform.python_version())'`!g" \
>>>>>>> <
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/Python.framework/
>>>>>>> Versions/2.6/
>>>>>>> Resources/Python.app/Contents/
>>>>>>> Info.plist.in" \
>>>>>>>>
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/Python.framework/
>>>>>>> Versions/2.6/
>>>>>>> Resources/Python.app/Contents/Info.plist"
>>>>>>> rm
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/Python.framework/
>>>>>>> Versions/2.6/
>>>>>>> Resources/Python.app/Contents/
>>>>>>> Info.plist.in"
>>>>>>> DYLD_FRAMEWORK_PATH=/Users/sindhikara/MyPrograms/amber11/
>>>>>>> AmberTools/
>>>>>>> src/etc/Python-2.6.6:
>>>>>>> ../python.exe ./scripts/BuildApplet.py \
>>>>>>> --destroot "" \
>>>>>>>
>>>>>>> --python=/Users/sindhikara/MyPrograms/amber11/Python.framework/
>>>>>>> Versions/2.6/Resources/Python.app/Contents/MacOS/Python`test
>>>>>>> -f
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/Python.framework/
>>>>>>> Versions/2.6/
>>>>>>> Resources/Python.app/Contents/MacOS/Python-32"
>>>>>>> && echo "-32"` \
>>>>>>> --output "/Applications/Python 2.6/Build Applet.app" \
>>>>>>> ./scripts/BuildApplet.py
>>>>>>> ./scripts/BuildApplet.py:37: DeprecationWarning: catching of
>>>>>>> string
>>>>>>> exceptions is deprecated
>>>>>>> except buildtools.BuildError, detail:
>>>>>>> Traceback (most recent call last):
>>>>>>> File "./scripts/BuildApplet.py", line 159, in <module>
>>>>>>> main()
>>>>>>> File "./scripts/BuildApplet.py", line 36, in main
>>>>>>> buildapplet()
>>>>>>> File "./scripts/BuildApplet.py", line 126, in buildapplet
>>>>>>> progress=verbose, destroot=destroot)
>>>>>>> File
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/AmberTools/src/etc/
>>>>>>> Python-2.6.6/Lib/plat-mac/buildtools.py",
>>>>>>> line 122, in process
>>>>>>> copy_codefragment, raw, others, filename, destroot)
>>>>>>> File
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/AmberTools/src/etc/
>>>>>>> Python-2.6.6/Lib/plat-mac/buildtools.py",
>>>>>>> line 151, in process_common
>>>>>>> is_update, raw, others, filename, destroot)
>>>>>>> File
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/AmberTools/src/etc/
>>>>>>> Python-2.6.6/Lib/plat-mac/buildtools.py",
>>>>>>> line 338, in process_common_macho
>>>>>>> builder.build()
>>>>>>> File
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/AmberTools/src/etc/
>>>>>>> Python-2.6.6/Lib/plat-mac/bundlebuilder.py",
>>>>>>> line 150, in build
>>>>>>> shutil.rmtree(self.bundlepath)
>>>>>>> File
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/AmberTools/src/etc/
>>>>>>> Python-2.6.6/Lib/shutil.py",
>>>>>>> line 212, in rmtree
>>>>>>> rmtree(fullname, ignore_errors, onerror)
>>>>>>> File
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/AmberTools/src/etc/
>>>>>>> Python-2.6.6/Lib/shutil.py",
>>>>>>> line 217, in rmtree
>>>>>>> onerror(os.remove, fullname, sys.exc_info())
>>>>>>> File
>>>>>>> "/Users/sindhikara/MyPrograms/amber11/AmberTools/src/etc/
>>>>>>> Python-2.6.6/Lib/shutil.py",
>>>>>>> line 215, in rmtree
>>>>>>> os.remove(fullname)
>>>>>>> OSError: [Errno 13] Permission denied: '/Applications/Python
>>>>>>> 2.6/
>>>>>>> Build
>>>>>>> Applet.app/Contents/Info.plist'
>>>>>>> make[2]: *** [install_BuildApplet] Error 1
>>>>>>> make[1]: *** [frameworkinstallapps] Error 2
>>>>>>> make: *** [python] Error 2
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 2011/7/12 Takeshi Baba <tbaba.cheng.es.osaka-u.ac.jp>
>>>>>>>
>>>>>>>> Dear Dr. Daniel J. Sindhikara
>>>>>>>>
>>>>>>>> Hi
>>>>>>>> I succeed in installing amber11 & AmberTools1.5 on the Mac a
>>>>>>>> few
>>>>>>>> days
>>>>>>>> ago.
>>>>>>>>
>>>>>>>> When I installed amber11, I got the same problems.
>>>>>>>>
>>>>>>>> So In my case I changed the netcdf to the latest
>>>>>>>> $B!J(B4.1.3) .
>>>>>>>>
>>>>>>>>
>>>>>>>> My method may not useful for your install.
>>>>>>>> Because my Mac is 10.5.8.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> My method to install amber11
>>>>>>>> ===============================
>>>>>>>> patch -p0 -N < bugfix.all.A.txt (AmberTool bug fix)
>>>>>>>> cd AmberTools/src
>>>>>>>> cp ~/netcdf-4.1.3.tar .
>>>>>>>> mv netcdf netcdf_old
>>>>>>>> mkdir netcdf
>>>>>>>> cd netcdf
>>>>>>>> tar -xvf ../netcdf-4.1.3.tar
>>>>>>>> mv netcdf-4.1.3/ src
>>>>>>>> cd ../
>>>>>>>> ./configure.tbaba -macAccelerate gnu
>>>>>>>> make install
>>>>>>>> cd ../../
>>>>>>>> patch -p0 -N < ../bugfix.all_11.txt
>>>>>>>> ./AT15_Amber11.py
>>>>>>>> cd src
>>>>>>>> make serial
>>>>>>>> cd ../AmberTools/src
>>>>>>>> cp ~/openmpi-1.4.3.tar .
>>>>>>>> tar -xvf openmpi-1.4.3.tar
>>>>>>>> ./configure_openmpi -np 8 gnu
>>>>>>>> rehash
>>>>>>>> make clean
>>>>>>>> ./configure.tbaba -macAccelerate -mpi gnu
>>>>>>>>
>>>>>>>> make install
>>>>>>>> cd ../../
>>>>>>>> ./AT15_Amber11.py
>>>>>>>> cd src/
>>>>>>>> make clean
>>>>>>>> make parallel
>>>>>>>> ===============================
>>>>>>>>
>>>>>>>> If you try my method, you should the following command
>>>>>>>>
>>>>>>>> tar xvfj Amber11.tar.bz2
>>>>>>>>
>>>>>>>> If you have a question, please give me a mail.
>>>>>>>>
>>>>>>>> Good luck
>>>>>>>>
>>>>>>>> Takeshi Baba
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>
>>>>
>> ----------------------------------------------------------------------------------------------------
>>>>>>>> Takeshi Baba
>>>>>>>>
>>>>>>>> Graduate School of Life Science, University of Hyogo,
>>>>>>>> 3-2-1 Koto, Kamigori, Akoh-gun, Hyogo 678-1297, Japan
>>>>>>>> E-mail: tbaba.cheng.es.osaka-u.ac.jp
>>>>>>>>
>>>>>>>>
>>>>>>
>>>>
>> ----------------------------------------------------------------------------------------------------
>>>>>>>>
>>>>>>>>
>>>>>>>> On 2011/07/12, at 20:35, Daniel Sindhikara wrote:
>>>>>>>>
>>>>>>>>> Hello.
>>>>>>>>> I am trying to run AMBER11 on a mac. I have been using
>>>>>>>>> Ambertools
>>>>>>>>> successfully, but when I try to make serial in the
>>>>>>>>> $AMBERHOME/src/
>>>>>>>>> directory
>>>>>>>>> I get some undefined symbols when trying to make sander (from
>>>>>>>>> command sudo
>>>>>>>>> make serial).
>>>>>>>>> My system is running Mac OSX10.6.8. I configured using ./
>>>>>>>>> configure
>>>>>>>>> -macAccelerate gnu
>>>>>>>>>
>>>>>>>>> Anyone run into this issue?
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Here is the start of the errors:
>>>>>>>>> gfortran-mp-4.5 -o sander constants.o state.o memory_module.o
>>>>>>>>> stack.o
>>>>>>>>> nose_hoover.o nose_hoover_vars.o nose_hoover_init.o
>>>>>>>>> qmmm_module.o
>>>>>>>>> trace.o
>>>>>>>>> lmod.o rand2.o lmodC.o xminC.o decomp.o icosasurf.o egb.o
>>>>>>>>> remd.o
>>>>>>>>> findmask.o
>>>>>>>>> relax_mat.o nmr.o multitmd.o multisander.o sander.o trajene.o
>>>>>>>>> cshf.o
>>>>>>>>> nmrcal.o mtmdcall.o pearsn.o printe.o runmin.o rdparm.o
>>>>>>>>> mdread.o
>>>>>>>>> locmem.o
>>>>>>>>> runmd.o getcor.o degcnt.o decnvh.o fastwt.o parallel.o shake.o
>>>>>>>>> ene.o
>>>>>>>>> mdwrit.o minrit.o set.o dynlib.o mdfil.o nmlsrc.o ew_force.o
>>>>>>>>> ew_setup.o
>>>>>>>>> ew_box.o ew_bspline.o ew_fft.o nonbond_list.o short_ene.o
>>>>>>>>> ew_recip.o
>>>>>>>>> pcshift.o align.o csa.o rfree.o rgroup.o amopen.o debug.o
>>>>>>>>> ew_recip_reg.o
>>>>>>>>> ew_handle_dips.o ew_dipole_recip.o mexit.o new_time.o
>>>>>>>>> extra_pts.o
>>>>>>>>> thermo_int.o matinv.o assert.o mmtsb.o mmtsb_client.o
>>>>>>>>> erfcfun.o
>>>>>>>>> constantph.o
>>>>>>>>> prn_dipoles.o ips.o sglds.o iwrap2.o amoeba_valence.o
>>>>>>>>> amoeba_multipoles.o
>>>>>>>>> amoeba_recip.o amoeba_interface.o amoeba_direct.o
>>>>>>>>> amoeba_mdin.o
>>>>>>>>> amoeba_adjust.o amoeba_self.o amoeba_vdw.o amoeba_induced.o
>>>>>>>>> amoeba_runmd.o
>>>>>>>>> bintraj.o spatial_recip.o spatial_fft.o parms.o softcore.o
>>>>>>>>> mbar.o
>>>>>>>>> molecule.o
>>>>>>>>> xref.o dssp.o charmm.o qm_mm.o qm_ewald.o
>>>>>>>>> qm2_variable_solvent.o
>>>>>>>>> qmmm_qmtheorymodule.o \
>>>>>>>>> pimd_vars.o pimd_force.o pimd_init.o cmd_vars.o
>>>>>>>>> cmd_matrix.o
>>>>>>>>> lscivr_vars.o lsc_init.o lsc_xp.o force.o /usr/local/amber11/
>>>>>>>>> lib/
>>>>>>>>> libsqm.a \
>>>>>>>>> mt19937.o ncsu-abmd-hooks.o ncsu-bbmd-ctxt.o ncsu-bbmd-
>>>>>>>>> hooks.o
>>>>>>>>> ncsu-cftree.o ncsu-colvar-math.o ncsu-colvar-type.o ncsu-
>>>>>>>>> colvar-
>>>>>>>>> utils.o
>>>>>>>>> ncsu-colvar.o ncsu-constants.o ncsu-cv-ANGLE.o ncsu-cv-
>>>>>>>>> DISTANCE.o
>>>>>>>>> ncsu-cv-HANDEDNESS.o ncsu-cv-MULTI_RMSD.o ncsu-cv-N_OF_BONDS.o
>>>>>>>>> ncsu-cv-N_OF_STRUCTURES.o ncsu-cv-R_OF_GYRATION.o ncsu-cv-
>>>>>>>>> TORSION.o
>>>>>>>>> ncsu-cv-LCOD.o ncsu-cv-COS_OF_DIHEDRAL.o ncsu-lexer.o ncsu-
>>>>>>>>> parser.o
>>>>>>>>> ncsu-pmd-hooks.o ncsu-rmsd.o ncsu-sander-hooks.o ncsu-sander-
>>>>>>>>> proxy.o
>>>>>>>>> ncsu-smd-hooks.o ncsu-umbrella.o ncsu-utils.o ncsu-value.o \
>>>>>>>>> /usr/local/amber11/lib/libFpbsa.a /usr/local/amber11/lib/
>>>>>>>>> arpack.a
>>>>>>>>> -framework Accelerate ../../AmberTools/src/lib/nxtsec.o \
>>>>>>>>> ../../AmberTools/src/lib/sys.a /usr/local/amber11/lib/
>>>>>>>>> libnetcdf.a
>>>>>>>>> Undefined symbols:
>>>>>>>>> "_nf_put_varm_real_", referenced from:
>>>>>>>>> ___netcdf_MOD_nf90_put_var_7d_fourbytereal in
>>>>>>>>> libnetcdf.a(netcdf.o)
>>>>>>>>> ___netcdf_MOD_nf90_put_var_6d_fourbytereal in
>>>>>>>>> libnetcdf.a(netcdf.o)
>>>>>>>>> ___netcdf_MOD_nf90_put_var_5d_fourbytereal in
>>>>>>>>> libnetcdf.a(netcdf.o)
>>>>>>>>> ___netcdf_MOD_nf90_put_var_4d_fourbytereal in
>>>>>>>>> libnetcdf.a(netcdf.o)
>>>>>>>>> ___netcdf_MOD_nf90_put_var_3d_fourbytereal in
>>>>>>>>> libnetcdf.a(netcdf.o)
>>>>>>>>> ___netcdf_MOD_nf90_put_var_2d_fourbytereal in
>>>>>>>>> libnetcdf.a(netcdf.o)
>>>>>>>>> ___netcdf_MOD_nf90_put_var_1d_fourbytereal in
>>>>>>>>> libnetcdf.a(netcdf.o)
>>>>>>>>> "_nf_delete_", referenced from:
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> --
>>>>>>>>> Dr. Daniel J. Sindhikara
>>>>>>>>> Institute for Molecular Science
>>>>>>>>> E-mail: sindhikara.gmail.com
>>>>>>>>> Website: http://sites.google.com/site/dansindhikara/
>>>>>>>>> --
>>>>>>>>> _______________________________________________
>>>>>>>>> AMBER mailing list
>>>>>>>>> AMBER.ambermd.org
>>>>>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> AMBER mailing list
>>>>>>>> AMBER.ambermd.org
>>>>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> --
>>>>>>> Dr. Daniel J. Sindhikara
>>>>>>> Institute for Molecular Science
>>>>>>> E-mail: sindhikara.gmail.com
>>>>>>> Website: http://sites.google.com/site/dansindhikara/
>>>>>>> --
>>>>>>> _______________________________________________
>>>>>>> AMBER mailing list
>>>>>>> AMBER.ambermd.org
>>>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>
>> ----------------------------------------------------------------------------------------------------
>>>>>> Takeshi Baba
>>>>>>
>>>>>> Graduate School of Life Science, University of Hyogo,
>>>>>> 3-2-1 Koto, Kamigori, Akoh-gun, Hyogo 678-1297, Japan
>>>>>> E-mail: tbaba.cheng.es.osaka-u.ac.jp
>>>>>>
>>>>>>
>>>>
>> ----------------------------------------------------------------------------------------------------
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> AMBER mailing list
>>>>>> AMBER.ambermd.org
>>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>>
>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Dr. Daniel J. Sindhikara
>>>>> Institute for Molecular Science
>>>>> E-mail: sindhikara.gmail.com
>>>>> Website: http://sites.google.com/site/dansindhikara/
>>>>> --
>>>>> _______________________________________________
>>>>> AMBER mailing list
>>>>> AMBER.ambermd.org
>>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>>
>>>>
>>>>
>>>>
>> ----------------------------------------------------------------------------------------------------
>>>> Takeshi Baba
>>>>
>>>> Graduate School of Life Science, University of Hyogo,
>>>> 3-2-1 Koto, Kamigori, Akoh-gun, Hyogo 678-1297, Japan
>>>> E-mail: tbaba.cheng.es.osaka-u.ac.jp
>>>>
>>>>
>> ----------------------------------------------------------------------------------------------------
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> AMBER mailing list
>>>> AMBER.ambermd.org
>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>
>>>
>>>
>>>
>>> --
>>> Dr. Daniel J. Sindhikara
>>> Institute for Molecular Science
>>> E-mail: sindhikara.gmail.com
>>> Website: http://sites.google.com/site/dansindhikara/
>>> --
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
>
> --
> Dr. Daniel J. Sindhikara
> Institute for Molecular Science
> E-mail: sindhikara.gmail.com
> Website: http://sites.google.com/site/dansindhikara/
> --
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--------------------------------------------------------------------------------------------------------
$BGO>l(B $B!!9d;K!!!J(BTakeshi Baba)
$BBg:eBg3XBg3X1!4pAC9)3X8&5f2JJ*<AAO...l962=3X9)3XNN0h(B
E-mail: tbaba.cheng.es.osaka-u.ac.jp
$B")(B560-8531
$BBg:eI\K-Cf;TBT7s;3D.(B1-3
$BBg:eBg3XBg3X1!4pAC9)3X8&5f2J!!J*<AAO...l96(B $B2=3X9)3XNN0h(B
$B!!CfLn8&5f<<(B
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Received on Tue Jul 26 2011 - 19:00:02 PDT
