[AMBER] Related to the correlation function

From: Sindrila Dutta banik <sindrila.duttabanik.yahoo.com>
Date: Mon, 18 Jul 2011 20:25:25 +0530 (IST)

Dear all
 
How to compute velocity correlation function? Or how shall I mention the velocity vectors in the script file
 
trajin MD.mdcrd
vector v0 .5 corr @6 order 2
vector v1 .7 corr @8 order 2
analyze timecorr vec1 v0 vec2 v0 tstep 1.0 tcorr 100.0 out v0.out

Or what shall I write at the underline portion?
 
With best regards
Sindrila
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Received on Mon Jul 18 2011 - 08:00:05 PDT
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