Re: [AMBER] sleap cannot deal with lipids?

From: David A Case <case.biomaps.rutgers.edu>
Date: Wed, 6 Jul 2011 07:33:36 -0400

On Wed, Jul 06, 2011, Tomoshi Kameda wrote:

> Different from Amber 10 and older version,
> we can not write scee and scnb parameter value in the script for sander or pmemd in amber11,
> and we have to assign it by "write14scale on" in the stage of leap.
> (In detail, see 2.9.3 "Scaling of electrostatic and nonbonded interactions" in AmberTools1.5 manual)
>
> Unfortunately, tleap can not deal with "write14scale" option...

Have you applied bugfix 3?

...dac


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Received on Wed Jul 06 2011 - 05:00:03 PDT
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