[AMBER] pairwise RMSD

From: Mannan <malie_03.yahoo.co.in>
Date: Tue, 28 Jun 2011 13:56:53 +0530 (IST)

Hi,

Is there any way to calculate pairwise RMSD of bound and unbound peptides for a comparison.

I would like to study the variations in conformations of the unbound with respect to the Bound,


Thanks in Advance,


Mannan
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Received on Tue Jun 28 2011 - 01:30:06 PDT