Dear All,
As I understand, Amoeba force field has it own parameters for water and ions. If I want to use Amoeba for MD simulation of the system solvated in water and ions, should I use the common command like,
- solvatebox dna TIP3PBOX 8.0
- addions dna Na+ 0
Also, should I load frcmod for TIP3P and for ions?
Regards,
Xioling
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Received on Fri Jun 17 2011 - 23:30:03 PDT
