Re: [AMBER] Amber 10: Compilation error

From: David A. Case <case.biomaps.rutgers.edu>
Date: Sat, 11 Jun 2011 09:56:59 -0400

On Fri, Jun 10, 2011, Kshatresh Dutta Dubey wrote:
>
> I have installed amber10 on Fedora 14, 64 bit linux operating machine.
> During the* serial compilation* it is giving error like-
>
> ............../lmod/lmod.a ../dcqtp/src/qmmm/libdivcon.a mt19937.o
> ncsu-abmd-hooks.o ncsu-bbmd-ctxt.o ncsu-bbmd-hooks.o ncsu-cftree.o
> ncsu-colvar-math.o ncsu-colvar-type.o ncsu-colvar-utils.o ncsu-colvar.o
> ncsu-constants.o ncsu-cv-ANGLE.o ncsu-cv-DISTANCE.o ncsu-cv-HANDEDNESS.o
> ncsu-cv-MULTI_RMSD.o ncsu-cv-N_OF_BONDS.o ncsu-cv-N_OF_STRUCTURES.o
> ncsu-cv-R_OF_GYRATION.o ncsu-cv-TORSION.o ncsu-lexer.o ncsu-parser.o
> ncsu-pmd-hooks.o ncsu-rmsd.o ncsu-sander-hooks.o ncsu-sander-proxy.o
> ncsu-smd-hooks.o ncsu-umbrella.o ncsu-utils.o ncsu-value.o \
> ../lapack/lapack.a ../blas/blas.a \
> ../lib/nxtsec.o ../lib/sys.a ../netcdf/lib/libnetcdf.a
> */usr/bin/ld: cannot find -lm
> /usr/bin/ld: cannot find -lc
> collect2: ld returned 1 exit status
> make: *** [sander] Error 1*

We would need to know what flags you gave to configure, what version of the
compilers you are using, and the complete final command that led to the error.
You might also post the config.h file you have.

...dac


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Received on Sat Jun 11 2011 - 07:00:02 PDT
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