[AMBER] MMPBSA: general question

From: George Tzotzos <gtzotzos.me.com>
Date: Tue, 07 Jun 2011 18:51:12 +0200

Hi everybody,

Having run to independent 10ns production runs on the same protein/ligand complex, I observed a difference in Delta G binding of ~ 2kcal/mol. The systems are properly equilibrated.

The above difference strikes me as too large. Is this something to be expected?

Regards

George

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Received on Tue Jun 07 2011 - 10:00:03 PDT
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