#running MD in 20ps with restraint on the model &cntrl imin=0, irest=0, ntx=1, ntb=1, cut=10.0, ntr=1, ntc=2, ntf=2, tempi=0.0, temp0=300.0, ntt=3, gamma_ln=1.0, nstlim=10000, dt=0.002, ntpr=100, ntwx=100,ntwr=1000 / Keep the model fixed with weak restraints 10.0 RES 1 200 END END