This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by netCDF configure 3.6.2, which was
generated by GNU Autoconf 2.61.  Invocation command line was

  $ ./configure --prefix=/home/majid/down/amber11/AmberTools/src/netcdf --disable-cxx

## --------- ##
## Platform. ##
## --------- ##

hostname = ubuntu
uname -m = x86_64
uname -r = 2.6.32-30-generic
uname -s = Linux
uname -v = #59-Ubuntu SMP Tue Mar 1 21:30:46 UTC 2011

/usr/bin/uname -p = unknown
/bin/uname -X     = unknown

/bin/arch              = unknown
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = unknown
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/games
PATH: /home/majid/down/amber11/bin


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2055: netCDF 3.6.2
configure:2096: checking build system type
configure:2114: result: x86_64-unknown-linux-gnu
configure:2136: checking host system type
configure:2151: result: x86_64-unknown-linux-gnu
configure:2196: checking for a BSD-compatible install
configure:2252: result: /usr/bin/install -c
configure:2263: checking whether build environment is sane
configure:2306: result: yes
configure:2371: checking for gawk
configure:2387: found /usr/bin/gawk
configure:2398: result: gawk
configure:2409: checking whether make sets $(MAKE)
configure:2430: result: yes
configure:2614: checking whether to enable maintainer-specific portions of Makefiles
configure:2623: result: no
configure:2642: checking user options
configure:2679: checking whether CXX is set to ''
configure:2683: result: no
configure:2687: checking whether FC is set to ''
configure:2691: result: no
configure:2695: checking whether F90 is set to ''
configure:2699: result: no
configure:2725: checking whether documentation is to be installed
configure:2733: result: no
configure:2749: checking whether Fortran compiler(s) should be tested during configure
configure:2757: result: yes
configure:2762: checking whether configure should try to set compiler flags
configure:2770: result: yes
configure:2774: checking whether FFIO will be used
configure:2782: result: no
configure:2797: checking whether to skip C++, F77, or F90 APIs if compiler is broken
configure:2805: result: yes
configure:2809: checking whether only the C library is desired
configure:2817: result: no
configure:2836: checking whether examples should be built
configure:2844: result: yes
configure:2858: checking whether F77 API is desired
configure:2867: result: yes
configure:2872: checking whether F90 API is desired
configure:2882: result: yes
configure:2886: checking whether fortran type sizes should be checked
configure:2894: result: yes
configure:2900: checking whether C API is desired
configure:2908: result: yes
configure:2915: checking where to get netCDF C-only library for separate fortran libraries
configure:2933: result: 
configure:2948: checking whether CXX API is desired
configure:2957: result: no
configure:2961: checking whether v2 netCDF API should be built
configure:2969: result: yes
configure:2990: checking whether the ncgen/ncdump should be built
configure:2998: result: yes
configure:3012: checking whether large file (> 2GB) tests should be run
configure:3020: result: no
configure:3034: checking whether extreme numbers should be used in tests
configure:3049: result: yes
configure:3063: checking where to put large temp files if large file tests are run
configure:3072: result: .
configure:3083: checking whether a win32 DLL is desired
configure:3091: result: no
configure:3117: checking whether separate fortran libs are desired
configure:3126: result: no
configure:3185: finding C compiler
configure:3305: checking for C compiler version
configure:3312: gcc --version >&5
gcc (Ubuntu 4.4.3-4ubuntu5) 4.4.3
Copyright (C) 2009 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3315: $? = 0
configure:3322: gcc -v >&5
Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.4.3-4ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.4/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared --enable-multiarch --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.4 --program-suffix=-4.4 --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i486 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.4.3 (Ubuntu 4.4.3-4ubuntu5) 
configure:3325: $? = 0
configure:3332: gcc -V >&5
gcc: '-V' option must have argument
configure:3335: $? = 1
configure:3358: checking for C compiler default output file name
configure:3385: gcc  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG  conftest.c  >&5
configure:3388: $? = 0
configure:3426: result: a.out
configure:3443: checking whether the C compiler works
configure:3453: ./a.out
configure:3456: $? = 0
configure:3473: result: yes
configure:3480: checking whether we are cross compiling
configure:3482: result: no
configure:3485: checking for suffix of executables
configure:3492: gcc -o conftest  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG  conftest.c  >&5
configure:3495: $? = 0
configure:3519: result: 
configure:3525: checking for suffix of object files
configure:3551: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:3554: $? = 0
configure:3577: result: o
configure:3581: checking whether we are using the GNU C compiler
configure:3610: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:3616: $? = 0
configure:3633: result: yes
configure:3638: checking whether gcc accepts -g
configure:3668: gcc -c -g -DNDEBUG conftest.c >&5
configure:3674: $? = 0
configure:3773: result: yes
configure:3790: checking for gcc option to accept ISO C89
configure:3864: gcc  -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:3870: $? = 0
configure:3893: result: none needed
configure:3922: checking for style of include used by make
configure:3950: result: GNU
configure:3978: checking dependency style of gcc
configure:4068: result: gcc3
configure:4086: checking whether gcc and cc understand -c and -o together
configure:4121: gcc -c conftest.c -o conftest2.o >&5
configure:4124: $? = 0
configure:4130: gcc -c conftest.c -o conftest2.o >&5
configure:4133: $? = 0
configure:4144: cc -c conftest.c >&5
configure:4147: $? = 0
configure:4155: cc -c conftest.c -o conftest2.o >&5
configure:4158: $? = 0
configure:4164: cc -c conftest.c -o conftest2.o >&5
configure:4167: $? = 0
configure:4185: result: yes
configure:4211: checking for an ANSI C-conforming const
configure:4286: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:4292: $? = 0
configure:4307: result: yes
configure:4338: finding Fortran compiler (will not be used if Fortran API is not desired)
configure:4728: checking for Fortran compiler version
configure:4735: gfortran --version >&5
GNU Fortran (Ubuntu 4.4.3-4ubuntu5) 4.4.3
Copyright (C) 2010 Free Software Foundation, Inc.

GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING

configure:4738: $? = 0
configure:4745: gfortran -v >&5
Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.4.3-4ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.4/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared --enable-multiarch --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.4 --program-suffix=-4.4 --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i486 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.4.3 (Ubuntu 4.4.3-4ubuntu5) 
configure:4748: $? = 0
configure:4755: gfortran -V >&5
gfortran: '-V' option must have argument
configure:4758: $? = 1
configure:4766: checking whether we are using the GNU Fortran compiler
configure:4785: gfortran -c  -O3 -mtune=generic  conftest.F >&5
configure:4791: $? = 0
configure:4808: result: yes
configure:4814: checking whether gfortran accepts -g
configure:4831: gfortran -c -g  conftest.f >&5
configure:4837: $? = 0
configure:4853: result: yes
configure:5003: checking for Fortran 77 compiler version
configure:5010: gfortran --version >&5
GNU Fortran (Ubuntu 4.4.3-4ubuntu5) 4.4.3
Copyright (C) 2010 Free Software Foundation, Inc.

GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING

configure:5013: $? = 0
configure:5020: gfortran -v >&5
Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.4.3-4ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.4/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared --enable-multiarch --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.4 --program-suffix=-4.4 --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i486 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.4.3 (Ubuntu 4.4.3-4ubuntu5) 
configure:5023: $? = 0
configure:5030: gfortran -V >&5
gfortran: '-V' option must have argument
configure:5033: $? = 1
configure:5041: checking whether we are using the GNU Fortran 77 compiler
configure:5060: gfortran -c  -O3 -mtune=generic conftest.F >&5
configure:5066: $? = 0
configure:5083: result: yes
configure:5089: checking whether gfortran accepts -g
configure:5106: gfortran -c -g conftest.f >&5
configure:5112: $? = 0
configure:5128: result: yes
configure:5172: setting up Fortran 90
configure:5191: checking for Fortran flag to compile .f90 files
configure:5213: gfortran -c  -O3 -mtune=generic  conftest.f90 >&5
configure:5219: $? = 0
configure:5238: result: none
configure:5268: checking fortran 90 modules inclusion flag
configure:5299: gfortran -c  -O3 -mtune=generic  conftest.f90 >&5
configure:5305: $? = 0
configure:5338: gfortran -c  -O3 -mtune=generic -Itmpdir_0  conftest.f90 >&5
configure:5344: $? = 0
configure:5375: result: -I
configure:5387: checking if Fortran compiler can handle Fortran-90
configure:5395: gfortran  -O3 -mtune=generic    conftest.f90
configure:5398: $? = 0
configure:5412: result: yes
configure:5421: finding C++ compiler (will not be used if C++ API is not desired)
configure:5488: checking for cl
configure:5518: result: no
configure:5488: checking for KCC
configure:5518: result: no
configure:5488: checking for CC
configure:5518: result: no
configure:5488: checking for cxx
configure:5518: result: no
configure:5488: checking for cc++
configure:5518: result: no
configure:5488: checking for xlC
configure:5518: result: no
configure:5488: checking for aCC
configure:5518: result: no
configure:5488: checking for c++
configure:5518: result: no
configure:5488: checking for g++
configure:5518: result: no
configure:5488: checking for egcs
configure:5518: result: no
configure:5488: checking for gcc
configure:5504: found /usr/bin/gcc
configure:5515: result: gcc
configure:5546: checking for C++ compiler version
configure:5553: gcc --version >&5
gcc (Ubuntu 4.4.3-4ubuntu5) 4.4.3
Copyright (C) 2009 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:5556: $? = 0
configure:5563: gcc -v >&5
Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.4.3-4ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.4/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared --enable-multiarch --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.4 --program-suffix=-4.4 --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i486 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.4.3 (Ubuntu 4.4.3-4ubuntu5) 
configure:5566: $? = 0
configure:5573: gcc -V >&5
gcc: '-V' option must have argument
configure:5576: $? = 1
configure:5579: checking whether we are using the GNU C++ compiler
configure:5608: gcc -c  -DNDEBUG conftest.cpp >&5
gcc: error trying to exec 'cc1plus': execvp: No such file or directory
configure:5614: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| /* end confdefs.h.  */
| 
| int
| main ()
| {
| #ifndef __GNUC__
|        choke me
| #endif
| 
|   ;
|   return 0;
| }
configure:5631: result: no
configure:5636: checking whether gcc accepts -g
configure:5666: gcc -c -g -DNDEBUG conftest.cpp >&5
gcc: error trying to exec 'cc1plus': execvp: No such file or directory
configure:5672: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| /* end confdefs.h.  */
| 
| int
| main ()
| {
| 
|   ;
|   return 0;
| }
configure:5704: gcc -c  -DNDEBUG conftest.cpp >&5
gcc: error trying to exec 'cc1plus': execvp: No such file or directory
configure:5710: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| /* end confdefs.h.  */
| 
| int
| main ()
| {
| 
|   ;
|   return 0;
| }
configure:5743: gcc -c -g -DNDEBUG conftest.cpp >&5
gcc: error trying to exec 'cc1plus': execvp: No such file or directory
configure:5749: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| /* end confdefs.h.  */
| 
| int
| main ()
| {
| 
|   ;
|   return 0;
| }
configure:5771: result: no
configure:5796: checking dependency style of gcc
configure:5886: result: gcc3
configure:6023: checking for a sed that does not truncate output
configure:6079: result: /bin/sed
configure:6082: checking for grep that handles long lines and -e
configure:6156: result: /bin/grep
configure:6161: checking for egrep
configure:6239: result: /bin/grep -E
configure:6255: checking for ld used by gcc
configure:6322: result: /usr/bin/ld
configure:6331: checking if the linker (/usr/bin/ld) is GNU ld
configure:6346: result: yes
configure:6351: checking for /usr/bin/ld option to reload object files
configure:6358: result: -r
configure:6376: checking for BSD-compatible nm
configure:6425: result: /usr/bin/nm -B
configure:6429: checking whether ln -s works
configure:6433: result: yes
configure:6440: checking how to recognize dependent libraries
configure:6626: result: pass_all
configure:6714: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:6717: $? = 0
configure:7160: checking how to run the C preprocessor
configure:7200: gcc -E -DNDEBUG conftest.c
configure:7206: $? = 0
configure:7237: gcc -E -DNDEBUG conftest.c
conftest.c:12:28: error: ac_nonexistent.h: No such file or directory
configure:7243: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:7276: result: gcc -E
configure:7305: gcc -E -DNDEBUG conftest.c
configure:7311: $? = 0
configure:7342: gcc -E -DNDEBUG conftest.c
conftest.c:12:28: error: ac_nonexistent.h: No such file or directory
configure:7348: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:7386: checking for ANSI C header files
configure:7416: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7422: $? = 0
configure:7521: gcc -o conftest  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG  conftest.c  >&5
configure:7524: $? = 0
configure:7530: ./conftest
configure:7533: $? = 0
configure:7550: result: yes
configure:7574: checking for sys/types.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for sys/stat.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for stdlib.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for string.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for memory.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for strings.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for inttypes.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for stdint.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7574: checking for unistd.h
configure:7595: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7601: $? = 0
configure:7617: result: yes
configure:7644: checking dlfcn.h usability
configure:7661: gcc -c  -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DNDEBUG conftest.c >&5
configure:7667: $? = 0
configure:7681: result: yes
configure:7685: checking dlfcn.h presence
configure:7700: gcc -E -DNDEBUG conftest.c
configure:7706: $? = 0
configure:7720: result: yes
configure:7753: checking for dlfcn.h
configure:7761: result: yes
configure:7784: checking how to run the C++ preprocessor
configure:7820: gcc -E -DNDEBUG conftest.cpp
gcc: error trying to exec 'cc1plus': execvp: No such file or directory
configure:7826: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h.  */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 		     Syntax error
configure:7820: gcc -E -DNDEBUG conftest.cpp
gcc: error trying to exec 'cc1plus': execvp: No such file or directory
configure:7826: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h.  */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 		     Syntax error
configure:7820: /lib/cpp -DNDEBUG conftest.cpp
cpp: error trying to exec 'cc1plus': execvp: No such file or directory
configure:7826: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h.  */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 		     Syntax error
configure:7820: /lib/cpp -DNDEBUG conftest.cpp
cpp: error trying to exec 'cc1plus': execvp: No such file or directory
configure:7826: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h.  */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 		     Syntax error
configure:7896: result: /lib/cpp
configure:7925: /lib/cpp -DNDEBUG conftest.cpp
cpp: error trying to exec 'cc1plus': execvp: No such file or directory
configure:7931: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h.  */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 		     Syntax error
configure:7925: /lib/cpp -DNDEBUG conftest.cpp
cpp: error trying to exec 'cc1plus': execvp: No such file or directory
configure:7931: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "3.6.2"
| #define PACKAGE_STRING "netCDF 3.6.2"
| #define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
| #define PACKAGE "netcdf"
| #define VERSION "3.6.2"
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE $TEMP_LARGE
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h.  */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 		     Syntax error
configure:7993: error: C++ preprocessor "/lib/cpp" fails sanity check
See `config.log' for more details.

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-unknown-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_cxx_compiler_gnu=no
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=gcc
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value=' -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE'
ac_cv_env_CPPFLAGS_set=set
ac_cv_env_CPPFLAGS_value=-DNDEBUG
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FCFLAGS_set=set
ac_cv_env_FCFLAGS_value=' -O3 -mtune=generic'
ac_cv_env_FC_set=set
ac_cv_env_FC_value=gfortran
ac_cv_env_FFLAGS_set=set
ac_cv_env_FFLAGS_value=' -O3 -mtune=generic'
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_fc_compiler_gnu=yes
ac_cv_fc_srcext_f90=none
ac_cv_header_dlfcn_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_host=x86_64-unknown-linux-gnu
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_path_install='/usr/bin/install -c'
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_CXXCPP=/lib/cpp
ac_cv_prog_ac_ct_CXX=gcc
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cc_gcc_c_o=yes
ac_cv_prog_cxx_g=no
ac_cv_prog_f77_g=yes
ac_cv_prog_fc_g=yes
ac_cv_prog_make_make_set=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_SED=/bin/sed
lt_cv_prog_gnu_ld=yes

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} /home/majid/down/amber11/AmberTools/src/netcdf/src/missing --run aclocal-1.9'
ALLOCA=''
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /home/majid/down/amber11/AmberTools/src/netcdf/src/missing --run tar'
AR=''
AS=''
AUTOCONF='${SHELL} /home/majid/down/amber11/AmberTools/src/netcdf/src/missing --run autoconf'
AUTOHEADER='${SHELL} /home/majid/down/amber11/AmberTools/src/netcdf/src/missing --run autoheader'
AUTOMAKE='${SHELL} /home/majid/down/amber11/AmberTools/src/netcdf/src/missing --run automake-1.9'
AWK='gawk'
BUILD_CXX_FALSE=''
BUILD_CXX_TRUE='#'
BUILD_C_FALSE='#'
BUILD_C_TRUE=''
BUILD_DLL_FALSE=''
BUILD_DLL_TRUE='#'
BUILD_EXAMPLES_FALSE='#'
BUILD_EXAMPLES_TRUE=''
BUILD_F77_FALSE='#'
BUILD_F77_TRUE=''
BUILD_F90_FALSE='#'
BUILD_F90_TRUE=''
BUILD_SEPARATE_FORTRAN_FALSE=''
BUILD_SEPARATE_FORTRAN_TRUE='#'
BUILD_SHARED_FALSE=''
BUILD_SHARED_TRUE='#'
BUILD_UTILITIES_FALSE='#'
BUILD_UTILITIES_TRUE=''
BUILD_V2_FALSE='#'
BUILD_V2_TRUE=''
CC='gcc'
CCDEPMODE='depmode=gcc3'
CFLAGS=' -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE'
CPP='gcc -E'
CPPFLAGS='-DNDEBUG'
CXX='gcc'
CXXCPP='/lib/cpp'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS=''
CYGPATH_W='echo'
DEFS=''
DEPDIR='.deps'
DLLTOOL=''
DSYMUTIL=''
ECHO='echo'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
F77='gfortran'
FC='gfortran'
FCFLAGS=' -O3 -mtune=generic'
FCFLAGS_f90=''
FFLAGS=' -O3 -mtune=generic'
FTPBINDIR=''
GREP='/bin/grep'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_DOCS_FALSE=''
INSTALL_DOCS_TRUE='#'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='${SHELL} $(install_sh) -c -s'
LARGE_FILE_TESTS_FALSE=''
LARGE_FILE_TESTS_TRUE='#'
LDFLAGS=''
LIBOBJS=''
LIBS=''
LIBTOOL=''
LN_S='ln -s'
LTLIBOBJS=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} /home/majid/down/amber11/AmberTools/src/netcdf/src/missing --run makeinfo'
MAKEWHATIS_CMD=''
MOD_FLAG='-I'
NETCDF_C_LIB=''
NM='/usr/bin/nm -B'
NMEDIT=''
NMFLAGS=''
OBJDUMP=''
OBJEXT='o'
PACKAGE='netcdf'
PACKAGE_BUGREPORT='support@unidata.ucar.edu'
PACKAGE_NAME='netCDF'
PACKAGE_STRING='netCDF 3.6.2'
PACKAGE_TARNAME='netcdf'
PACKAGE_VERSION='3.6.2'
PATH_SEPARATOR=':'
RANLIB=''
SED='/bin/sed'
SET_MAKE=''
SHAREEXT_DYLIB_FALSE=''
SHAREEXT_DYLIB_TRUE='#'
SHAREEXT_SL_FALSE=''
SHAREEXT_SL_TRUE='#'
SHELL='/bin/bash'
STRIP=''
TEST_F77_FALSE='#'
TEST_F77_TRUE=''
TEST_PARALLEL_FALSE=''
TEST_PARALLEL_TRUE=''
UPPER_CASE_MOD_FALSE=''
UPPER_CASE_MOD_TRUE=''
USE_FFIO_FALSE=''
USE_FFIO_TRUE='#'
USE_HDF5_DIR_FALSE=''
USE_HDF5_DIR_TRUE='#'
USE_NETCDF4_FALSE=''
USE_NETCDF4_TRUE='#'
USE_NETCDF_C_LIB_DIR_FALSE=''
USE_NETCDF_C_LIB_DIR_TRUE='#'
VERSION='3.6.2'
WHATIS=''
ac_ct_CC=''
ac_ct_CXX='gcc'
ac_ct_F77=''
ac_ct_FC=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='x86_64-unknown-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='unknown'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-unknown-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='unknown'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='/home/majid/down/amber11/AmberTools/src/netcdf/src/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='mkdir -p --'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/home/majid/down/amber11/AmberTools/src/netcdf'
prog=''
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

#define PACKAGE_NAME "netCDF"
#define PACKAGE_TARNAME "netcdf"
#define PACKAGE_VERSION "3.6.2"
#define PACKAGE_STRING "netCDF 3.6.2"
#define PACKAGE_BUGREPORT "support@unidata.ucar.edu"
#define PACKAGE "netcdf"
#define VERSION "3.6.2"
#define USE_EXTREME_NUMBERS 1
#define TEMP_LARGE $TEMP_LARGE
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1

configure: exit 1