Re: [AMBER] xleap not installed

From: Jason Swails <jason.swails.gmail.com>
Date: Sat, 5 Mar 2011 10:02:28 -0500

Hello,

You can't just *download* the proper files. You need to make sure they're
appropriate for the rest of your system. Most operating systems have
specific instructions about how to install this package. That's why I asked
what operating system (which version of linux) you are using.

All the best,
Jason

On Sat, Mar 5, 2011 at 7:54 AM, sonali dhindwal <
sonali11dhindwal.yahoo.co.in> wrote:

> Hello Jason,
>
> I checked /usr/lib/ and then got
> [sonali.localhost lib]$ ls libXt*
> libXt.so.6 libXt.so.6.0.0 libXtst.so.6 libXtst.so.6.1.0
>
> Is that means that I have libXt which you have mentioned in ur reply, if
> that is not the case , can you please mail me some reliable URLs from where
> I can download these files and where installing instructions are given.
> I hope that this will not be much work for you.
> Thanks in advance.
> Regards
>
> T
>
>
> --
> Sonali Dhindwal
>
> “Live as if you were to die tomorrow. Learn as if you were to live
> forever.”
>
> --- On Thu, 3/3/11, Jason Swails <jason.swails.gmail.com> wrote:
>
> From: Jason Swails <jason.swails.gmail.com>
> Subject: Re: [AMBER] xleap not installed
> To: "AMBER Mailing List" <amber.ambermd.org>
> Date: Thursday, 3 March, 2011, 12:19 PM
>
> It appears as though the file /usr/lib/libXt.so is missing, which I think
> is
> typically a symlink to whichever version of the library is *active* at the
> time. What OS are you using? Did you follow the instructions in the last
> email I sent regarding which packages to install? (Particularly the
> developer packages; i.e. xorg-dev for Ubuntu).
>
> Hope this helps,
> Jason
>
> On Wed, Mar 2, 2011 at 11:26 PM, sonali dhindwal <
> sonali11dhindwal.yahoo.co.in> wrote:
>
> > Jason,
> >
> > when i tried locate libXt, it is giving this,
> >
> > does that mean that i have libxt installed ?
> >
> > /usr/lib/libXt.so.6
> > /usr/lib/libXt.so.6.0.0
> > /usr/lib/libXtst.so.6
> > /usr/lib/libXtst.so.6.1.0
> > /usr/lib64/libXt.so.6
> > /usr/lib64/libXt.so.6.0.0
> > /usr/lib64/libXtst.so.6
> > /usr/lib64/libXtst.so.6.1.0
> > /usr/share/doc/libXt-1.0.2
> > /usr/share/doc/libXtst-1.0.1
> > /usr/share/doc/libXt-1.0.2/AUTHORS
> > /usr/share/doc/libXt-1.0.2/COPYING
> > /usr/share/doc/libXt-1.0.2/ChangeLog
> > /usr/share/doc/libXt-1.0.2/INSTALL
> > /usr/share/doc/libXt-1.0.2/NEWS
> > /usr/share/doc/libXt-1.0.2/README
> > /usr/share/doc/libXtst-1.0.1/AUTHORS
> > /usr/share/doc/libXtst-1.0.1/COPYING
> > /usr/share/doc/libXtst-1.0.1/ChangeLog
> > /usr/share/doc/libXtst-1.0.1/INSTALL
> > /usr/share/doc/libXtst-1.0.1/README
> >
> > if yes, then how should i proceed to install
> > xleap?
> > thanks and regards
> >
> > --
> > Sonali Dhindwal
> >
> > “Live as if you were to die tomorrow. Learn as if you were to live
> > forever.”
> >
> > --- On Tue, 1/3/11, Jason Swails <jason.swails.gmail.com> wrote:
> >
> > From: Jason Swails <jason.swails.gmail.com>
> > Subject: Re: [AMBER] xleap not installed
> > To: "AMBER Mailing List" <amber.ambermd.org>
> > Date: Tuesday, 1 March, 2011, 8:06 PM
> >
> > xleap must not have been installed. xleap will only be installed if the
> > proper X Libraries can be found. Try running the configure script again
> > and
> > keep your eyes open for any errors or warnings printed out (something to
> > the
> > effect of
> >
> > Warning: the X11 libraries are not in the usual location !
> >
> > To search for them try the command: locate libXt
> > On new Fedora OS's install the libXt-devel libXext-devel
> > libX11-devel libICE-devel libSM-devel packages.
> > On old Fedora OS's install the xorg-x11-devel package.
> > On RedHat OS's install the XFree86-devel package.
> > On Ubuntu OS's install the xorg-dev package.
> > For the moment Amber will be configured not to build XLEaP.
> >
> > If you see this message, try following the instructions appropriate for
> > your
> > operating system if it's on the list. If not, consult google on how to
> > install the X libraries for your system.
> >
> > Hope this helps,
> > Jason
> >
> > On Tue, Mar 1, 2011 at 9:24 AM, sonali dhindwal <
> > sonali11dhindwal.yahoo.co.in> wrote:
> >
> > > Hi Bill,
> > >
> > > now it is
> > showing error
> > >
> > > -- /usr/local/amber11/bin/xleap: Command not found.
> > >
> > >
> > > Sonali Dhindwal
> > >
> > > “Live as if you were to die tomorrow. Learn as if you were to live
> > > forever.”
> > >
> > > --- On Tue, 1/3/11, Bill Miller III <brmilleriii.gmail.com> wrote:
> > >
> > > From: Bill Miller III <brmilleriii.gmail.com>
> > > Subject: Re: [AMBER] xleap not installed
> > > To: "AMBER Mailing List" <amber.ambermd.org>
> > > Date: Tuesday, 1 March, 2011, 7:42 PM
> > >
> > > Try replacing the 'exe' folder with the 'bin' folder. So the command
> > should
> > > be like this:
> > >
> > > $AMBERHOME/bin/xleap -s -f
> > $AMBERHOME/dat/leap/cmd/leaprc.ff99SB
> > >
> > > -Bill
> > >
> > > On Tue, Mar 1, 2011 at 8:56 AM, sonali dhindwal <
> > > sonali11dhindwal.yahoo.co.in> wrote:
> > >
> > > > Dear Sir,
> > > >
> > > > I have just installed Amber11 and Ambertools on my system at
> > > > /usr/local/amber11/. I did the basic amber test, it passed all the
> > > things.
> > > > But now while trying the tutorial, when i gave this command
> > > > $AMBERHOME/exe/xleap -s -f $AMBERHOME/dat/leap/cmd/leaprc.ff99SB
> > > >
> > > > it is not working giving the error "/usr/local/amber11/exe/xleap:
> > Command
> > > > not found."
> > > >
> > > > Please help to run xleap.
> > > > Thanks and regards
> > > >
> > > > --
> > > > Sonali Dhindwal
> > > >
> > > > “Live as if you were to
> > die tomorrow. Learn as if you were to live
> > > > forever.”
> > > >
> > > > _______________________________________________
> > > > AMBER mailing list
> > > > AMBER.ambermd.org
> > > > http://lists.ambermd.org/mailman/listinfo/amber
> > > >
> > >
> > >
> > >
> > > --
> > > Bill Miller III
> > > Quantum Theory Project,
> > > University of Florida
> > > Ph.D. Graduate Student
> > > 352-392-6715
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> > >
> > >
> > _______________________________________________
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> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> >
> >
> >
> > --
> > Jason M. Swails
> > Quantum Theory Project,
> > University of Florida
> > Ph.D. Candidate
> > 352-392-4032
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> >
> >
> > _______________________________________________
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> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Candidate
> 352-392-4032
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>
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>



-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Sat Mar 05 2011 - 07:30:03 PST
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