Dear All,
How can I calculate RMSD for a given region in the protein by aligning the core structure with a given crystal structure? I have made some changes in the protein (mutation) and due to that some loop regions are likely to become flexible. Where the core structure is unlikely to move. I have crystal structure of the mutated form as well, that I can use as reference in the alignment process.
Thanking you.
With best regards,
Rahul
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Received on Mon Feb 07 2011 - 11:00:07 PST
