Re: [AMBER] NaN error in .rst files

From: Marek Maly <marek.maly.ujep.cz>
Date: Wed, 26 Jan 2011 15:28:09 +0100

Hello Jason,
I have bugfix 12 applied.

   Marek


Dne Wed, 26 Jan 2011 15:14:25 +0100 Jason Swails <jason.swails.gmail.com>
napsal/-a:

> Which bug fixes have you applied? Keep in mind that there have been 12
> to
> date, one of them fixing an issue with pmemd.cuda and cut != 8.
>
> Good luck!
> Jason
>
> On Wed, Jan 26, 2011 at 9:04 AM, case <case.biomaps.rutgers.edu> wrote:
>
>> On Wed, Jan 26, 2011, Marek Maly wrote:
>> >
>> > I recently also obtained NaN problem in one of my simulation using
>> > pmemd.cuda on GTX 470:
>> > see - relevant data below. Unfortunately it is unreproducable as I am
>> > using ig=-1.
>>
>> You *can* re-run things in this circumstance: pmemd will print out the
>> value
>> of the random seed that was actually used, and you can put that back
>> into
>> your input file. This can be helpful to see if the problem is the same
>> every
>> time.
>>
>> ....dac
>>
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>>
>
>
>


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Received on Wed Jan 26 2011 - 07:00:06 PST
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