Sir
I am simulated a DNA of 4o base pair using "nuc.nab" and xleap.
I am heating it from 0 to 400K in following step.
Stage 1 heating of DNA 0 to 50K
&cntrl
imin=0, irest=0, ntx=1,
nstlim=10000, dt=0.0005,
ntc=1, ntf=1,
ntt=1, tautp=1.0,
tempi=0.0, temp0=50.0,
ntpr=50, ntwx=50,
ntb=0, igb=0,
cut=12.
and continuously............
When temperature is incresing, bonds are opening but I am getting a
problem after 200K the one strand of DNA is partially disappeared.
I want to know why it is.
Please help me.
--
SHESH NATH
RESEARCH SCHOLAR,
THEORETICAL CONDENSED MATTER PHYSICS,
DEPARTMENT OF PHYSICS,
BANARAS HINDU UNIVERSITY,
VARANASI-221005
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Received on Sat Jan 08 2011 - 01:30:03 PST
