[AMBER] SASA and Molecular Volume

From: Hopkins, Robert <hopkins.uhcl.edu>
Date: Mon, 22 Nov 2010 16:35:47 -0600

Amber Users/Developers


1.) In the calculation of the Solvent Accessible Surface Area (SASA)
of a molecule in MMPBSA, is the specific value for this variable
available for display? I can't seem to find it if it is.

2.) Is there a convenient way of calculating molecular volumes? In
searching the archives, I found only one reference to the volume of a
molecular cavity by possibly using the Volmap plugin from VMD.



Bob Hopkins


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Received on Mon Nov 22 2010 - 15:00:02 PST
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