Re: [AMBER] Targeted MD

From: Jordan, Brad <>
Date: Wed, 3 Nov 2010 10:09:31 -0700

Sorry Carlos. I've not gotten any emails. I'll check my filter and go through the archives.


-----Original Message-----
From: Carlos Simmerling []
Sent: Wednesday, November 03, 2010 10:03 AM
To: AMBER Mailing List
Subject: Re: [AMBER] Targeted MD

you have sent a similar email several times and we've tried to reply- it's
not clear if you have gotten any of the replies. If yes, then try to reply
to that one with more questions so that the thread stays together. If not,
you might check to see what's wrong with your email.
good luck

On Wed, Nov 3, 2010 at 12:55 PM, Jordan, Brad <> wrote:

> I'm attempting to simulate folding of a protein using targeted MD. I have a
> final structure (as the target) from the PDB and several thousand simulated
> distance restraints. Should AMBER be able to fold this up from an extended
> strand? I'm just curious if this would work theoretically before I put a lot
> of time into it.
> Thanks,
> Brad
> _______________________________________________
> AMBER mailing list
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Received on Wed Nov 03 2010 - 10:30:06 PDT
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