[AMBER] Interaction energy calculation

From: aneesh cna <aneeshcna.gmail.com>
Date: Mon, 1 Nov 2010 01:04:46 -0400

Dear Amber users,

                  I am studying DNA-drug interaction using Amber 9.0
package. From the literature I came to know that the drug have both
hydrophobic as well as electrostatic interaction with DNA and hydrophobic
interaction is dominant over electrostatics. How can I quantify these two
interactions from my simulation data?

Thanks in advance

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Received on Sun Oct 31 2010 - 22:30:03 PDT
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