Re: [AMBER] Output problem on Amber 9

From: tanya singh <tanyabioinfo.gmail.com>
Date: Fri, 29 Oct 2010 22:12:58 +0530

Hi ,

I need some help on proteins. I am developing a program to stitch amino
acids templates and generate a linear polypeptide chain. The program is
similar to the sequence command in amber.

I am facing a problem in stitching the proline molecule becoz of the cyclic
structure. Can you help me in figuring out a way to solve the proline
problem.

How does amber stitch proline so efficiently??

thanks in advance

Tanya Singh
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Oct 29 2010 - 10:00:03 PDT
Custom Search