On Tue, Oct 19, 2010, Beale, John wrote:
>
> Can someone help me? I would like to monitor a hydrogen bond in a
> protein over my trajectory, showing the hbond/no hbond behavior over
> time. Is there a way to do this in ptraj?
For just one H-bond, use the distance command to compute the distance between
the donor and the acceptor, then plot that.
....dac
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Received on Tue Oct 19 2010 - 12:00:03 PDT
