hello all
I want to calculate binding affinity of two protein to its cognate DNA i.e.
binding affinity for a protein bound its
cognate DNA and then binding of second protein which seems to increase the
binding affinity of first protein to DNA to above complex.
Can I use MD simulatiion here to calculate it?
Is AMBER usefull for it if yes then which module?
Sangita Kachhap
JRF
BIC,IMTECH
CHANDIGARH
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Received on Mon Oct 18 2010 - 06:00:05 PDT
