Hello sir ,
I use amber 9 to calculate mm_pbsa using my own complex . I operated it
according to the tutorials step by step ,
but when i executed $AMBERHOME/exe/mm_pbsa.pl binding_energy.mmpbsa >
binding_energy.log ,
it showed
' Use of uninitialized value in concatenation (.) or string at
/../amber9/src/mm_pbsa/mm_pbsa_readinput.pm line 76, <IN> line 210.
Use of uninitialized value in hash element at /../amber9/src/mm_pbsa/
mm_pbsa_readinput.pm line 260, <IN> line 210.
Died at /../amber9/src/mm_pbsa/mm_pbsa_readinput.pm line 362.'
The job was failed . I attched the corresponding files in the accessories.
Is there something wrong with mm_pbsa_readinput.pm file ?
Look forward for your reply.
Thanks,
Sincerely, ZhangYan
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Received on Sun Oct 17 2010 - 07:30:04 PDT
