I tried to build a starting structure from the protein sequence containing
440 residues.
However, the residues were overloaded in tleap.
I tried to input the sequence starting from 100, 150, 200 residues and so
on.
I could get topology and coordinate files from tleap when inputting 249
residues.
When I increased the residues to 250, tleap did work.
Does AMBER set limitation for the input sequence in tleap?
For large proteins, what shall I do to get starting files?
Thanks for help!
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Received on Thu Oct 14 2010 - 22:30:03 PDT
