The amber tutorials are located on ambermd.org/tutorials . The REMD
tutorial is Advanced 7, and should help you get started. Assuming TMD is
targeted MD, there is no tutorial that I can see on that site. It is
described in the manual, though. As a note on targeted MD, amber11 allows
for multiple targeted MD simulations.
Good luck!
Jason
On Fri, Oct 8, 2010 at 11:15 PM, fancy2012 <fancy2012.yeah.net> wrote:
> Dear amber users,
> Are there some tutorials of TMD and REMD for us to learn? Could somebody
> give some websites? Thanks very much!
> All the best,
> fancy
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Fri Oct 08 2010 - 20:30:03 PDT