Checkout the "cluster" command for ptraj in the AmberTools manual.
--Niel
________________________________________
From: ros [ros.servidor.unam.mx]
Sent: Wednesday, September 29, 2010 6:48 PM
To: AMBER Mailing List
Subject: [AMBER] Cluster analysis
Hello AMBER users!
I want to do cluster analysis to a series of 20ns simulations of DNA
with a copper-complex. I am following the tutorial and downloaded
MMTSB_toolbox. I am reading about cluster.pl but noticed that the
options of the tutorial are a bit different. That made me think, is
the cluster analysis of MMTSB the most recent one? Is there a way to
do it maybe in AmberTools 1.3? Or some other tool?
Thank you for your thoughts and comments.
Good day.
Rodrigo
--
Enviado desde mi dispositivo móvil
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Received on Wed Sep 29 2010 - 18:30:04 PDT
