The error is related to the fillratio being too small for the ligand
calculation. Here is a previous response to someone with the same problem.
http://archive.ambermd.org/201004/0397.html
This should fix your problem. Good luck!
-Bill
On Mon, Sep 27, 2010 at 7:48 AM, juzer stationwala <juzer.niper.gmail.com>wrote:
> there was no such file generated only file which may be related to ligand
> corresponding to sander was *pbsa_lig.1.out *
> I am hereby attaching it
> --
> Regards:
>
> Juzer Stationwala,
> Dept. of Pharmacoinformatics,
> National Institute of Pharmaceutical Education & Research
> (NIPER)
> Mohali,
> Punjab.
> India
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>
--
Bill Miller III
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-6715
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Received on Mon Sep 27 2010 - 05:00:07 PDT
