[AMBER] can't save the PDB file to produce topology and coordinates file

From: geyan <geyan.big.ac.cn>
Date: Sun, 26 Sep 2010 12:43:53 +0800

Hi,Amber friends,
   I met a strange problem. I use Modeller to produce a target protein structure. When I load it in Amber using loadpdb command and try to save it for furthure use, error message appears, first telling me that there are duplicating atoms, and then consequently informing saving parameter file failed. After I use ambpdb command to reproduce the structure, I found the duplicate ones.
   Now the point is even if I delete the same item manually to only leave one to produce parameter file, the error remains the same. I'm really helpless to figure this out.
Hope your help!

2010-09-26



geyan
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Received on Sat Sep 25 2010 - 22:00:04 PDT
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