Dear All,
I am informing you that we have recently developed a GRID-enabled web
portal for the use of the AMBER molecular dynamics package, which was
developed by CERM researchers within a EC FP7 funded project (Contract
no. 213010 – e-NMR).
This portal allows an easy access - with a common web browser - to the
main functionalities of AMBER, and, in particular, provides a means for
a user-friendly set up of common and advanced AMBER parameters.
The portal allows researchers to:
- perform a completely automated refinement of protein structures, based
on molecular dynamics in explicit solvent;
- have a fast throughput of their results, thanks to the totally
transparent grid computing infrastructure;
- access all their data easily via the web while keeping full security;
- navigate across, browse, visualize and download data for all their
jobs thanks to the hierarchical organization in project directories
provided by the portal;
- user-friendly interact with the jobs highlighting their currently
status (scheduled, running, canceled, terminated) as well as retrieve
results.
I really hope you (and your students and post-docs) will try our
GRID-enabled web portal for the use of the AMBER visiting either of one
of these two links:
-
http://py-enmr.cerm.unifi.it/
OR
-
http://www.enmr.eu/webportal/ (and clicking on <AMBER> menu item)
Sincerely,
Lucio Ferella
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Lucio Ferella
CIRMMP - Consorzio Interuniversitario Risonanze
Magnetiche di Metalloproteine Paramagnetiche
CERM - Magnetic Resonance Center
Via Sacconi, 6 - 50019 Sesto Fiorentino (FI)
Tel: +39 055 4574 243
Web: http://www.cerm.unifi.it/home
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Received on Mon Sep 20 2010 - 05:30:03 PDT
