[AMBER] Amber11 compile issue

From: Anuradha Mittal <anuradha.mittal.gmail.com>
Date: Sat, 18 Sep 2010 21:00:48 -0500

Hi,

I am trying to install Amber11 in parallel using intel processor.

I am getting the following error:
ld: cannot find -lrdmacm
make[2]: *** [pmemd.MPI] Error 1
make[2]: Leaving directory `/u/ac/amitta2/amber11/src/pmemd/src'
make[1]: *** [parallel] Error 2
make[1]: Leaving directory `/u/ac/amitta2/amber11/src/pmemd'
make: *** [parallel] Error 2

which mpif90
/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/bin/mpif90

which mpirun
/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/bin/mpirun

mpif90 -show
ifort -L/usr/local/ofed-1.2.5.5/lib64
-I/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/include
-I/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/include
-L/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/lib -lmpichf90 -Wl,-rpath
-Wl,/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/lib -lmpichf90 -lmpich
-lpthread -lrdmacm -libverbs -libumad -lrt

Any help will be much appreciated.

Thanks
Anu
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Received on Sat Sep 18 2010 - 19:30:03 PDT
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