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-- On Tue, Sep 14, 2010 at 10:52 PM, Jason Swails <jason.swails.gmail.com>wrote: > Have you applied all bugfixes? What version of amber are you using? > > On Tue, Sep 14, 2010 at 9:59 PM, manoj singh <mks.amber.gmail.com> wrote: > > > Hi, > > > > I am using mm_pbsa.pl to do per-residue decomposition. The calculation > > appears to be trapped in a infinite loop with the following message. I > have > > no clue what is going on and will be very thankful for any response. > > > > Manoj > > > > ----- > > > > No values for GB_TGBSUR existing -> Skipping > > Processing PB SPBSOL > > Doing 1 PB SPB > > Doing 1 GB SGBSUR > > No values for GB_SGBSUR existing -> Skipping > > Processing PB TPBTOT > > Doing 1 PB TPBSOL > > No values for PB_TPBSOL existing -> Skipping > > Processing PB BPBTOT > > Doing 1 PB BPBSOL > > No values for PB_BPBSOL existing -> Skipping > > Processing PB BPBSOL > > Doing 1 PB BPB > > Doing 1 GB BGBSUR > > No values for GB_BGBSUR existing -> Skipping > > Processing PB SPBTOT > > Doing 1 PB SPBSOL > > No values for PB_SPBSOL existing -> Skipping > > Processing PB TPBSOL > > Doing 1 PB TPB > > Doing 1 GB TGBSUR > > No values for GB_TGBSUR existing -> Skipping > > Processing PB SPBSOL > > Doing 1 PB SPB > > Doing 1 GB SGBSUR > > No values for GB_SGBSUR existing -> Skipping > > _______________________________________________ > > AMBER mailing list > > AMBER.ambermd.org > > http://lists.ambermd.org/mailman/listinfo/amber > > > > > > -- > Jason M. Swails > Quantum Theory Project, > University of Florida > Ph.D. Graduate Student > 352-392-4032 > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber > _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amberReceived on Tue Sep 14 2010 - 20:00:05 PDT