[AMBER] LD and SGLD runs (Simulations)

From: <shaktis.gbu.ac.in>
Date: Tue, 14 Sep 2010 07:23:40 +0530 (IST)

Hi!
I am trying to run Langevian dynamics. Below is my input file:
 2.5ps MD equilibration on protein
&cntrl
 imin = 0,
 irest = 0,
 ntx=1,
 ntb=0,
 cut = 10,
 temp0 = 300.0,tempi=300.0,
 ntt = 3,gamma_ln=1.0,
 nstlim = 2500, dt = 0.001,
 ntpr = 200, ntwx = 500, ntwr = 1000
/

Every time I run it, It gives an error. If I remove the "gamma_ln" option
it runs properly.
I am not able to figure out the problem?

Regards
Shakti


-- 
Dr. Shakti Sahi
Assistant Professor
School of Biotechnology
Gautam Buddha University
Greater Noida-201308
India
Ph: +91-120-2344277
Cell: +91-9911171897
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Received on Mon Sep 13 2010 - 19:00:04 PDT
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