Hello all
I am installing python script for mm_pbsa in amber10.
As instruction given in tutorial I have instralled mpi4py python module version
mpi4py-1.2.1 in my home directory and my python version is Python 2.4.3 it has
installed successfully.
To install python script
I download it move it to $AMBERHOME/src directory and unpack it, move to unpacked
directory and typed make serial installation end with following error :
make serial
/bin/bash setup.sh
Python version 2 detected. No file conversion necessary.
/bin/cp MMPBSA.py *pyc /home/sangita/amber10/bin
/home/sangita/amber10/bin/nab -o mmpbsa_py_nabnmode mmpbsa_entropy.nab
mmpbsa_entropy.nab:58 fld 'ls_method' not in struct 'xo'
mmpbsa_entropy.nab:58 operator '=': left operand has wrong class.
mmpbsa_entropy.nab:58 unknown attribute 'ls_method'
mmpbsa_entropy.nab:59 fld 'ls_maxiter' not in struct 'xo'
mmpbsa_entropy.nab:59 operator '=': left operand has wrong class.
mmpbsa_entropy.nab:59 unknown attribute 'ls_maxiter'
mmpbsa_entropy.nab:60 fld 'ls_maxatmov' not in struct 'xo'
mmpbsa_entropy.nab:60 operator '=': left operand has wrong class.
mmpbsa_entropy.nab:60 unknown attribute 'ls_maxatmov'
nab2c failed!
make: [install] Error 1 (ignored)
/bin/mv mmpbsa_py_nabnmode /home/sangita/amber10/bin
/bin/mv: cannot stat `mmpbsa_py_nabnmode': No such file or directory
make: [install] Error 1 (ignored)
In my unpacked directory there was not such file when I checked it.
So what I should do to install it.
With regard
Sangita Kachhap
JRF
BIC,IMTECH
CHANDIGARH
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Sep 12 2010 - 04:00:04 PDT
