Hello,
ntwx is the keyword to write out a trajectory of snapshots. See its
description in the amber manual.
Good luck!
Jason
On Tue, Sep 7, 2010 at 5:30 AM, Baptiste Legrand <bap.legrand.gmail.com>wrote:
> Dear all,
>
> I'm a new amber user (I'm more familiar with cns). At the moment, I'm
> following the tutorial4 on the nmr refinement on a DNA duplex to
> determine a modified peptide conformation. All is fine but I'm quite
> surprised to have only one structure at the end of the sander run and
> not a set of structure. Is there an option to activate or a more
> specific protocol to calculate several structures?
>
> Thanks
>
> Best regards,
> Baptiste
>
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Tue Sep 07 2010 - 05:00:03 PDT
