> trajin pdb_bond_wat_md1_exp.mdcrd
> ...
This is ptraj input.
> all volume and standard files give me RDF=0, only carnal has
> got some non zero values in both cases!
You are comparing carnal to ptraj..
> how do I get the density from carnal, what unit it is?
I believe RDF is in units of atomic centers.
> I really do not what carnal is, am using amber9.
Carnal is no longer supported, hopefully you will get the
answers you need regarding ptraj.
Bill
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Received on Thu Jul 29 2010 - 13:30:03 PDT
