Tried to build again pmemd.cuda with CUDA SDK 3.0 and no luck:
--------------------------------------------------------------------------------------------------------------
make[3]: *** [kForcesUpdate.o] Error 1
make[3]: Leaving directory `/usr/local/amber11/src/pmemd/src/cuda'
make[2]: *** [-L/usr/local/cuda/lib64] Error 2
make[2]: Leaving directory `/usr/local/amber11/src/pmemd/src'
make[1]: *** [cuda] Error 2
make[1]: Leaving directory `/usr/local/amber11/src/pmemd'
make: *** [cuda] Error 2
--------------------------------------------------------------------------------------------------------------
How can I tell if I have a TESTsander environment?
Thanks for the help.
Rodrigo.
2010/7/19 case <case.biomaps.rutgers.edu>
> On Mon, Jul 19, 2010, ros wrote:
>
> > Tried the #!/bin/bash and the script ran, but with problems:
> >
> > ==============================================================
> > cd chamber/dhfr_cmap_pbc/ && ./Run.dhfr_cmap_pbc_charmm_noshake.md -1
> SPDP
> > netcdf.mod
>
> My guess is that you have a TESTsander environment variable set; if you do,
> unset it.
>
> ....dac
>
>
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Received on Mon Jul 19 2010 - 22:30:02 PDT
