Hi Sasha,
> We are looking for modeling some fairly large sets of protein
> complexes,
> and this might be too much for just a few Tesla cards. Does anyone know
> of any commercial/academic places that have a functioning high density
> GPU-based clusters and offer compute time on those?
This is the purpose of the NSF TeraGrid machines.
https://www.teragrid.org/
There is currently NCSA Lincoln which has S1070's and there will be several
new GPU based machines coming online shortly. I have run AMBER on NCSA
Lincoln and it works great.
You can get a startup allocation (the size varies by machine by 30,000 core
hours is typical) with just a CV and an abstract. If you want more then you
need to submit a 7 page proposal. Submissions are open every 3 months for a
1 year allocation. (
https://pops-submit.teragrid.org/)
All the best
Ross
/\
\/
|\oss Walker
---------------------------------------------------------
| Assistant Research Professor |
| San Diego Supercomputer Center |
| Adjunct Assistant Professor |
| Dept. of Chemistry and Biochemistry |
| University of California San Diego |
|
http://www.rosswalker.co.uk |
http://www.wmd-lab.org/ |
| Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
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Received on Fri Jul 09 2010 - 19:30:03 PDT
