I always follow this tutorial for compiling parallel and works all the time.
http://www.somewhereville.com/?p=437*
*Home it helps!
Rodrigo
2010/7/9 Jorgen Simonsen <jorgen589.gmail.com>
> Hi all,
>
> I am trying to compile a version 10 of amber with mpi but I am not able to
> get it to compile. I configure the config.h file by
>
> ./configure_amber -openmpi ifort
>
> which is then created succefully and it is created for compilation with
> openmpi. The mpi library is load module load openmpi and I try to compile
> using
>
> make parallel
>
> I get an error which I dont know how to fix
>
> /opt/intel/Compiler/11.0/083/lib/intel64/libimf.so: warning: warning:
> feupdateenv is not implemented and will always fail
> /opt/openmpi/1.3.3-1.el5.fys.ifort.11.1/lib64/libmpi.so: undefined
> reference
> to `__intel_sse2_strlen'
> make[1]: *** [sander.MPI] Error 1
> make[1]: Leaving directory `home/amber10/src/sander'
> make: *** [parallel] Error 2
>
> I guess there is a library problem - how to resolve this thanks in advance
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Received on Fri Jul 09 2010 - 12:00:03 PDT
