Hi,
Is there any way to align two small molecules, say two phosphate,
using Leap, Ptraj or vmd? I am going to simulate some proteins with
different ligands bound. How can I add the ligands with appropriate
pose?
Thanks a lot,
Yubo Fan
Computational Chemistry and Drug Design Lab
Bioengineering and Bioinformatics Program
The Methodist Hospital Research Institute (TMHRI)
6565 Fannin St B5-022
Houston, TX 77030
Email: yfan.tmhs.org
Phone: (713) 441-8681
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Received on Fri Jul 09 2010 - 11:00:05 PDT
