Re: [AMBER] How to find the angle bond etc parameters used for practicular atom type used in AMBER?

From: James Maier <jimbo.maier.gmail.com>
Date: Fri, 9 Jul 2010 10:21:55 -0400

Cat,

All the parameter files can be found in
   $AMBERHOME/dat/leap/parm/

and will be called
   parm*.dat

So the ff99 parameters, for instance, will be located at
   $AMBERHOME/dat/leap/parm/parm99.dat

James


On Fri, Jul 9, 2010 at 7:23 AM, Catein Catherine <askamber23.hotmail.com>wrote:

>
> Dear All,
>
>
>
> What is the best way to read the atom type and force field parameters
> (radius, angle or distance or dihedral angle) used for a practicular atom
> type?
>
>
>
> I was trying to define a new atom for my MD. I think it share some of the
> properties of the standard atoms. I want to reference to those used in
> amber. Where can I found those parameters used in amber?
>
>
>
> Best regards,
>
>
>
> cat
>
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Received on Fri Jul 09 2010 - 07:30:05 PDT
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