In leap, addions will do it. See the AmberTools manual for instructions on
using "addions" in leap.
On Wed, Jun 30, 2010 at 10:58 PM, Ping <xiuchen.iastate.edu> wrote:
> Dear all,
>
> Does anyone know the command for adding counterions (Cl-) to a single
> protein that has been protonated by 19 H+?
>
> Thank you in advance!
>
> Sincerely,
> xiuping
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Wed Jun 30 2010 - 23:00:03 PDT
