ptraj found! Using /home/vaibhav/software/amber10/exe/ptraj
sander found! Using /home/vaibhav/software/amber10/exe/sander (serial only!)
nmode found! Using /home/vaibhav/software/amber10/exe/nmode

Preparing trajectories with ptraj... 
50 frames were read in and processed by ptraj for use in calculation.

Starting sander calls


Starting nmode calculations...
Timing:
Processing Trajectories With Ptraj:       0.254 min.
Total Harmonic nmode Calculation Time: 2281.748 min.
Output File Writing Time:                 0.002 min.

Total Time Taken:                      2282.009 min.


MMPBSA Finished. Thank you for using. Please send any bugs/suggestions/comments to mmpbsa.amber@gmail.com