[tripos@craycx1 pmemd]$ make install cd src && make install make[1]: Entering directory `/home/tripos/amber10_install/amber10/src/pmemd/src' /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC gbl_constants.fpp gbl_constants.f90 mpif90 -c -O3 gbl_constants.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC gbl_datatypes.fpp gbl_datatypes.f90 mpif90 -c -O3 gbl_datatypes.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC state_info.fpp state_info.f90 mpif90 -c -O3 state_info.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC file_io_dat.fpp file_io_dat.f90 mpif90 -c -O3 file_io_dat.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC pmemd_lib.fpp pmemd_lib.f90 mpif90 -c -O3 pmemd_lib.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC parallel_dat.fpp parallel_dat.f90 mpif90 -c -O3 parallel_dat.f90 In file parallel_dat.f90:380 subroutine parallel_dat_setup(atm_cnt, num_ints, num_reals) 1 Warning: Unused variable num_reals declared at (1) /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC file_io.fpp file_io.f90 mpif90 -c -O3 file_io.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC mdin_ctrl_dat.fpp mdin_ctrl_dat.f90 mpif90 -c -O3 mdin_ctrl_dat.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC axis_optimize.fpp axis_optimize.f90 mpif90 -c -O3 axis_optimize.f90 /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC fft1d.fpp fft1d.f90 mpif90 -c -O3 fft1d.f90 In file fft1d.f90:126 subroutine fft1d_destroy(fft_hdl, num_ints, num_reals) 1 Warning: Unused variable num_ints declared at (1) In file fft1d.f90:126 subroutine fft1d_destroy(fft_hdl, num_ints, num_reals) 1 Warning: Unused variable num_reals declared at (1) In file fft1d.f90:73 subroutine fft1d_create(fft_hdl, fft_size, num_ints, num_reals) 1 Warning: Unused variable num_ints declared at (1) In file fft1d.f90:73 subroutine fft1d_create(fft_hdl, fft_size, num_ints, num_reals) 1 Warning: Unused variable num_reals declared at (1) /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC charmm.fpp charmm.f90 mpif90 -c -O3 charmm.f90 In file charmm.f90:94 subroutine check_for_charmm(nlines,scee,scnb,ffdesc) 1 Warning: Unused variable scnb declared at (1) In file charmm.f90:94 subroutine check_for_charmm(nlines,scee,scnb,ffdesc) 1 Warning: Unused variable scee declared at (1) /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC nextprmtop_section.fpp nextprmtop_section.f90 mpif90 -c -O3 nextprmtop_section.f90 nextprmtop_section.f90: In function 'nnbchr': nextprmtop_section.f90:422: warning: '__result_nnbchr' may be used uninitialized in this function nextprmtop_section.f90: In function 'nxtsec': nextprmtop_section.f90:132: warning: 'il2us' may be used uninitialized in this function /usr/bin/cpp -traditional -P -I/usr/mpi/gcc/mvapich-1.1.0/include -DPUBFFT -DMPI -DDIRFRC_EFS -DDIRFRC_COMTRANS -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC prmtop_dat.fpp prmtop_dat.f90 mpif90 -c -O3 prmtop_dat.f90 In file prmtop_dat.f90:56 gbl_dihed_allocsize, next_mult_fac & ! 1 Error: Syntax error in data declaration at (1) In file prmtop_dat.f90:1622 glb_natex(:) = 0 1 Error: Unclassifiable statement at (1) In file prmtop_dat.f90:71 gbl_angle_ub_allocsize, gbl_dihed_imp_allocsize, & 1 Error: Symbol 'gbl_angle_ub_allocsize' at (1) has no IMPLICIT type In file prmtop_dat.f90:66 bonda_idx, anglea_idx, diheda_idx, & 1 Error: Symbol 'anglea_idx' at (1) has no IMPLICIT type In file prmtop_dat.f90:66 bonda_idx, anglea_idx, diheda_idx, & 1 Error: Symbol 'bonda_idx' at (1) has no IMPLICIT type In file prmtop_dat.f90:72 cmap_term_count, cmap_type_count, & 1 Error: Symbol 'cmap_type_count' at (1) has no IMPLICIT type In file prmtop_dat.f90:72 cmap_term_count, cmap_type_count, & 1 Error: Symbol 'cmap_term_count' at (1) has no IMPLICIT type In file prmtop_dat.f90:66 bonda_idx, anglea_idx, diheda_idx, & 1 Error: Symbol 'diheda_idx' at (1) has no IMPLICIT type In file prmtop_dat.f90:67 gbl_bond_allocsize, gbl_angle_allocsize, & 1 Error: Symbol 'gbl_angle_allocsize' at (1) has no IMPLICIT type In file prmtop_dat.f90:73 gbl_cmap_allocsize 1 Error: Symbol 'gbl_cmap_allocsize' at (1) has no IMPLICIT type In file prmtop_dat.f90:67 gbl_bond_allocsize, gbl_angle_allocsize, & 1 Error: Symbol 'gbl_bond_allocsize' at (1) has no IMPLICIT type In file prmtop_dat.f90:68 gbl_dihed_allocsize, & 1 Error: Symbol 'gbl_dihed_allocsize' at (1) has no IMPLICIT type In file prmtop_dat.f90:71 gbl_angle_ub_allocsize, gbl_dihed_imp_allocsize, & 1 Error: Symbol 'gbl_dihed_imp_allocsize' at (1) has no IMPLICIT type In file prmtop_dat.f90:63 common / prmtop_int / natom, ntypes, nbonh, ntheth, nphih, next, nres, & 1 Error: Symbol 'natom' at (1) has no IMPLICIT type In file prmtop_dat.f90:65 ifbox, ifcap, nspm, numextra, ncopy, nttyp, & 1 Error: Symbol 'ifbox' at (1) has no IMPLICIT type In file prmtop_dat.f90:65 ifbox, ifcap, nspm, numextra, ncopy, nttyp, & 1 Error: Symbol 'ifcap' at (1) has no IMPLICIT type In file prmtop_dat.f90:63 common / prmtop_int / natom, ntypes, nbonh, ntheth, nphih, next, nres, & 1 Error: Symbol 'nbonh' at (1) has no IMPLICIT type In file prmtop_dat.f90:64 nbona, ntheta, nphia, numbnd, numang, nptra, nphb, & 1 Error: Symbol 'nbona' at (1) has no IMPLICIT type In file prmtop_dat.f90:63 common / prmtop_int / natom, ntypes, nbonh, ntheth, nphih, next, nres, & 1 Error: Symbol 'next' at (1) has no IMPLICIT type In file prmtop_dat.f90:65 ifbox, ifcap, nspm, numextra, ncopy, nttyp, & 1 Error: Symbol 'ncopy' at (1) has no IMPLICIT type In file prmtop_dat.f90:70 nimphi, nimprtyp, & 1 Error: Symbol 'nimprtyp' at (1) has no IMPLICIT type In file prmtop_dat.f90:70 nimphi, nimprtyp, & 1 Error: Symbol 'nimphi' at (1) has no IMPLICIT type In file prmtop_dat.f90:63 common / prmtop_int / natom, ntypes, nbonh, ntheth, nphih, next, nres, & 1 Error: Symbol 'nphih' at (1) has no IMPLICIT type In file prmtop_dat.f90:64 nbona, ntheta, nphia, numbnd, numang, nptra, nphb, & 1 Error: Symbol 'nphia' at (1) has no IMPLICIT type In file prmtop_dat.f90:64 nbona, ntheta, nphia, numbnd, numang, nptra, nphb, & 1 Error: Symbol 'nphb' at (1) has no IMPLICIT type In file prmtop_dat.f90:64 nbona, ntheta, nphia, numbnd, numang, nptra, nphb, & 1 Error: Symbol 'nptra' at (1) has no IMPLICIT type In file prmtop_dat.f90:63 common / prmtop_int / natom, ntypes, nbonh, ntheth, nphih, next, nres, & 1 Error: Symbol 'nres' at (1) has no IMPLICIT type In file prmtop_dat.f90:65 ifbox, ifcap, nspm, numextra, ncopy, nttyp, & 1 Error: Symbol 'numextra' at (1) has no IMPLICIT type In file prmtop_dat.f90:64 nbona, ntheta, nphia, numbnd, numang, nptra, nphb, & 1 Error: Symbol 'numang' at (1) has no IMPLICIT type In file prmtop_dat.f90:64 nbona, ntheta, nphia, numbnd, numang, nptra, nphb, & 1 Error: Symbol 'ntheta' at (1) has no IMPLICIT type In file prmtop_dat.f90:65 ifbox, ifcap, nspm, numextra, ncopy, nttyp, & 1 Error: Symbol 'nspm' at (1) has no IMPLICIT type In file prmtop_dat.f90:63 common / prmtop_int / natom, ntypes, nbonh, ntheth, nphih, next, nres, & 1 Error: Symbol 'ntypes' at (1) has no IMPLICIT type In file prmtop_dat.f90:65 ifbox, ifcap, nspm, numextra, ncopy, nttyp, & 1 Error: Symbol 'nttyp' at (1) has no IMPLICIT type In file prmtop_dat.f90:63 common / prmtop_int / natom, ntypes, nbonh, ntheth, nphih, next, nres, & 1 Error: Symbol 'ntheth' at (1) has no IMPLICIT type In file prmtop_dat.f90:69 nub, nubtypes, & 1 Error: Symbol 'nubtypes' at (1) has no IMPLICIT type In file prmtop_dat.f90:69 nub, nubtypes, & 1 Error: Symbol 'nub' at (1) has no IMPLICIT type In file prmtop_dat.f90:64 nbona, ntheta, nphia, numbnd, numang, nptra, nphb, & 1 Error: Symbol 'numbnd' at (1) has no IMPLICIT type In file prmtop_dat.f90:1615 gbl_natex(next * next_mult_fac), & 1 Error: Symbol 'next_mult_fac' at (1) has no IMPLICIT type In file prmtop_dat.f90:1424 call mpi_bcast(gbl_natex, next * next_mult_fac, mpi_integer, 0, & 1 Error: Symbol 'next_mult_fac' at (1) has no IMPLICIT type In file prmtop_dat.f90:346 next_mult_fac = 2 1 Error: Symbol 'next_mult_fac' at (1) has no IMPLICIT type make[1]: *** [prmtop_dat.o] Error 1 make[1]: Leaving directory `/home/tripos/amber10_install/amber10/src/pmemd/src' make: *** [install] Error 2 [tripos@craycx1 pmemd]$