Hello,
I am trying to compile AmberTool 1.4 on Snow Leopard with Intel 10.1.014. And got following errors:
...
mkdir .libs
icc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o ncgen main.o load.o ncgentab.o escapes.o getfill.o init.o genlib.o ../libsrc/.libs/libnetcdf.a
Undefined symbols:
"___builtin___memmove_chk", referenced from:
_ncio_spx_move in libnetcdf.a(posixio.o)
_ncio_spx_move in libnetcdf.a(posixio.o)
_ncio_spx_move in libnetcdf.a(posixio.o)
_ncio_spx_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
"___builtin___memcpy_chk", referenced from:
_nc_def_var in libnetcdf.a(var.o)
_nc_def_var in libnetcdf.a(var.o)
_dup_NC_vararrayV in libnetcdf.a(var.o)
_dup_NC_vararrayV in libnetcdf.a(var.o)
_dup_NC_vararrayV in libnetcdf.a(var.o)
_dup_NC_vararrayV in libnetcdf.a(var.o)
_dup_NC_vararrayV in libnetcdf.a(var.o)
_dup_NC_vararrayV in libnetcdf.a(var.o)
_nc_put_vara_text in libnetcdf.a(putget.o)
_nc_put_vara_text in libnetcdf.a(putget.o)
_nc_put_vara_schar in libnetcdf.a(putget.o)
_nc_put_vara_schar in libnetcdf.a(putget.o)
_nc_put_vara_short in libnetcdf.a(putget.o)
_nc_put_vara_short in libnetcdf.a(putget.o)
_nc_put_vara_int in libnetcdf.a(putget.o)
_nc_put_vara_int in libnetcdf.a(putget.o)
_nc_put_vara_float in libnetcdf.a(putget.o)
_nc_put_vara_float in libnetcdf.a(putget.o)
_nc_put_vara_double in libnetcdf.a(putget.o)
_nc_put_vara_double in libnetcdf.a(putget.o)
_nc_get_vara_text in libnetcdf.a(putget.o)
_nc_get_vara_text in libnetcdf.a(putget.o)
_nc_get_vara_schar in libnetcdf.a(putget.o)
_nc_get_vara_schar in libnetcdf.a(putget.o)
_nc_get_vara_short in libnetcdf.a(putget.o)
_nc_get_vara_short in libnetcdf.a(putget.o)
_nc_get_vara_int in libnetcdf.a(putget.o)
_nc_get_vara_int in libnetcdf.a(putget.o)
_nc_get_vara_float in libnetcdf.a(putget.o)
_nc_get_vara_float in libnetcdf.a(putget.o)
_nc_get_vara_double in libnetcdf.a(putget.o)
_nc_get_vara_double in libnetcdf.a(putget.o)
_fill_NC_var in libnetcdf.a(putget.o)
_fill_NC_var in libnetcdf.a(putget.o)
_fill_NC_var in libnetcdf.a(putget.o)
_fill_NC_var in libnetcdf.a(putget.o)
_fill_NC_var in libnetcdf.a(putget.o)
_fill_NC_var in libnetcdf.a(putget.o)
_nc_copy_var in libnetcdf.a(putget.o)
_nc_copy_var in libnetcdf.a(putget.o)
_NCxvarcpy in libnetcdf.a(putget.o)
_NCxvarcpy in libnetcdf.a(putget.o)
_nc_put_vara_long in libnetcdf.a(putget.o)
_nc_put_vara_long in libnetcdf.a(putget.o)
_nc_put_varm_long in libnetcdf.a(putget.o)
_nc_put_varm_long in libnetcdf.a(putget.o)
_nc_put_vara_uchar in libnetcdf.a(putget.o)
_nc_put_vara_uchar in libnetcdf.a(putget.o)
_nc_put_varm_uchar in libnetcdf.a(putget.o)
_nc_put_varm_uchar in libnetcdf.a(putget.o)
_nc_get_vara_long in libnetcdf.a(putget.o)
_nc_get_vara_long in libnetcdf.a(putget.o)
_nc_get_varm_long in libnetcdf.a(putget.o)
_nc_get_varm_long in libnetcdf.a(putget.o)
_nc_get_vara_uchar in libnetcdf.a(putget.o)
_nc_get_vara_uchar in libnetcdf.a(putget.o)
_nc_get_varm_uchar in libnetcdf.a(putget.o)
_nc_get_varm_uchar in libnetcdf.a(putget.o)
_nc_put_vars_long in libnetcdf.a(putget.o)
_nc_put_vars_long in libnetcdf.a(putget.o)
_nc_put_vars_uchar in libnetcdf.a(putget.o)
_nc_put_vars_uchar in libnetcdf.a(putget.o)
_nc_get_vars_long in libnetcdf.a(putget.o)
_nc_get_vars_long in libnetcdf.a(putget.o)
_nc_get_vars_uchar in libnetcdf.a(putget.o)
_nc_get_vars_uchar in libnetcdf.a(putget.o)
_nc_copy_att in libnetcdf.a(attr.o)
_nc_copy_att in libnetcdf.a(attr.o)
_nc_copy_att in libnetcdf.a(attr.o)
_nc_copy_att in libnetcdf.a(attr.o)
_dup_NC_attrarrayV in libnetcdf.a(attr.o)
_dup_NC_attrarrayV in libnetcdf.a(attr.o)
_ncx_pad_putn_void in libnetcdf.a(ncx.o)
_ncx_pad_putn_void in libnetcdf.a(ncx.o)
_ncx_pad_putn_void in libnetcdf.a(ncx.o)
_ncx_pad_putn_void in libnetcdf.a(ncx.o)
_ncx_putn_void in libnetcdf.a(ncx.o)
_ncx_putn_void in libnetcdf.a(ncx.o)
_ncx_pad_getn_void in libnetcdf.a(ncx.o)
_ncx_pad_getn_void in libnetcdf.a(ncx.o)
_ncx_getn_void in libnetcdf.a(ncx.o)
_ncx_getn_void in libnetcdf.a(ncx.o)
_ncx_pad_putn_text in libnetcdf.a(ncx.o)
_ncx_pad_putn_text in libnetcdf.a(ncx.o)
_ncx_pad_putn_text in libnetcdf.a(ncx.o)
_ncx_pad_putn_text in libnetcdf.a(ncx.o)
_ncx_putn_text in libnetcdf.a(ncx.o)
_ncx_putn_text in libnetcdf.a(ncx.o)
_ncx_pad_getn_text in libnetcdf.a(ncx.o)
_ncx_pad_getn_text in libnetcdf.a(ncx.o)
_ncx_getn_text in libnetcdf.a(ncx.o)
_ncx_getn_text in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_double in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_double in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_float in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_float in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_long in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_long in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_int in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_int in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_short in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_short in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_uchar in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_uchar in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_schar in libnetcdf.a(ncx.o)
_ncx_pad_putn_short_schar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_double in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_float in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_long in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_int in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_short in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_schar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_schar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_schar in libnetcdf.a(ncx.o)
_ncx_pad_putn_schar_schar in libnetcdf.a(ncx.o)
_ncx_putn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_putn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_putn_schar_schar in libnetcdf.a(ncx.o)
_ncx_putn_schar_schar in libnetcdf.a(ncx.o)
_ncx_pad_getn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_pad_getn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_pad_getn_schar_schar in libnetcdf.a(ncx.o)
_ncx_pad_getn_schar_schar in libnetcdf.a(ncx.o)
_ncx_getn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_getn_schar_uchar in libnetcdf.a(ncx.o)
_ncx_getn_schar_schar in libnetcdf.a(ncx.o)
_ncx_getn_schar_schar in libnetcdf.a(ncx.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_ncio_px_move in libnetcdf.a(posixio.o)
_px_get in libnetcdf.a(posixio.o)
_px_get in libnetcdf.a(posixio.o)
....
Wondering if anybody can give some advices on how to proceed.
Thanks in advance!
Chen
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Received on Thu Apr 29 2010 - 12:00:05 PDT
