Hi,
after loadamber the prepin file, as I found that the charge on all 3 O of (phosphate group O=PO2), is equalI,I decided to change the order of one bond to double, with this command:
bond CAP.P1 CAP.O8 "="
but I got this error: bond Argument #1 is type string must be of type: [atom]
I also add the number of atom according to the .prepin numbering but this error still exist.
I searching the mailing list but still have problem
Thank's
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Received on Thu Apr 15 2010 - 19:00:03 PDT
