Hello
I have a question regarding the analyze mode command in ptraj
I have done a normal mode analysis with nmode and dumped the normal
modes to a file. I then analyzed the modes with ptraj using
trajin lac.pdb
analyze modes displ file vecs end 6690 out ptraj.out
where vecs are the file from nmode.
My question is: what are the units of the displacements in the output file?
Best regards,
Samuel
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Apr 15 2010 - 11:30:04 PDT
